Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.96□□□□□ -0.34
APOBP04114 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.96□□□□□ -0.34
APOBP04114 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
APOBP04114 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.96□□□□□ -0.34
APOBP04114 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOBP04114 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBP04114 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC12.95□□□□□ -0.34
APOBP04114 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
APOBP04114 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.95□□□□□ -0.34
APOBP04114 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC12.95□□□□□ -0.34
APOBP04114 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.95□□□□□ -0.34
APOBP04114 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBP04114 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.95□□□□□ -0.34
APOBP04114 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.95□□□□□ -0.34
APOBP04114 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.95□□□□□ -0.34
APOBP04114 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
APOBP04114 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOBP04114 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC12.95□□□□□ -0.34
APOBP04114 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBP04114 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBP04114 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBP04114 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOBP04114 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
APOBP04114 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC12.94□□□□□ -0.34
APOBP04114 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
APOBP04114 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 AL137013.1-201ENST00000432946 1228 ntBASIC12.94□□□□□ -0.34
APOBP04114 SLC25A3P1-201ENST00000443844 931 ntBASIC12.94□□□□□ -0.34
APOBP04114 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.94□□□□□ -0.34
APOBP04114 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 AC005363.2-201ENST00000618631 242 ntBASIC12.94□□□□□ -0.34
APOBP04114 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOBP04114 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOBP04114 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
APOBP04114 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.94□□□□□ -0.34
APOBP04114 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOBP04114 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.93□□□□□ -0.34
APOBP04114 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBP04114 DUX4L26-201ENST00000489078 1255 ntBASIC12.93□□□□□ -0.34
APOBP04114 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.93□□□□□ -0.34
APOBP04114 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBP04114 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBP04114 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 CRYGFP-201ENST00000418459 633 ntBASIC12.93□□□□□ -0.34
APOBP04114 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.93□□□□□ -0.34
APOBP04114 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 NUDT16P1-203ENST00000513809 620 ntBASIC12.93□□□□□ -0.34
APOBP04114 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.93□□□□□ -0.34
APOBP04114 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
APOBP04114 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC12.93□□□□□ -0.34
APOBP04114 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.93□□□□□ -0.34
APOBP04114 AC104076.2-201ENST00000448912 469 ntBASIC12.93□□□□□ -0.34
APOBP04114 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBP04114 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBP04114 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.93□□□□□ -0.34
APOBP04114 AC073195.1-201ENST00000607241 877 ntBASIC12.93□□□□□ -0.34
APOBP04114 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBP04114 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBP04114 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOBP04114 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBP04114 AC116050.2-201ENST00000612102 1779 ntBASIC12.92□□□□□ -0.34
APOBP04114 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBP04114 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBP04114 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBP04114 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBP04114 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOBP04114 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOBP04114 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBP04114 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBP04114 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.92□□□□□ -0.34
APOBP04114 FITM1-202ENST00000559294 800 ntBASIC12.92□□□□□ -0.34
APOBP04114 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms