Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFAP04085 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.15■□□□□ 0.66
PDGFAP04085 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFAP04085 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFAP04085 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFAP04085 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFAP04085 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PDGFAP04085 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFAP04085 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFAP04085 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFAP04085 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.15■□□□□ 0.66
PDGFAP04085 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.15■□□□□ 0.66
PDGFAP04085 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFAP04085 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFAP04085 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PDGFAP04085 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFAP04085 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
PDGFAP04085 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.15■□□□□ 0.66
PDGFAP04085 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
PDGFAP04085 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.14■□□□□ 0.66
PDGFAP04085 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PDGFAP04085 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.14■□□□□ 0.65
PDGFAP04085 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PDGFAP04085 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.14■□□□□ 0.65
PDGFAP04085 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PDGFAP04085 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.14■□□□□ 0.65
PDGFAP04085 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 HLA-B-256ENST00000639848 1089 ntBASIC19.14■□□□□ 0.65
PDGFAP04085 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
PDGFAP04085 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.14■□□□□ 0.65
PDGFAP04085 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFAP04085 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDGFAP04085 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFAP04085 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PDGFAP04085 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.13■□□□□ 0.65
PDGFAP04085 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFAP04085 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDGFAP04085 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFAP04085 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
PDGFAP04085 RPPH1-201ENST00000516869 333 ntBASIC19.13■□□□□ 0.65
PDGFAP04085 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFAP04085 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.13■□□□□ 0.65
PDGFAP04085 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.13■□□□□ 0.65
PDGFAP04085 AC233263.1-201ENST00000578059 224 ntBASIC19.13■□□□□ 0.65
PDGFAP04085 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDGFAP04085 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFAP04085 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDGFAP04085 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.13■□□□□ 0.65
PDGFAP04085 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDGFAP04085 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.13■□□□□ 0.65
PDGFAP04085 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PDGFAP04085 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDGFAP04085 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.12■□□□□ 0.65
PDGFAP04085 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
PDGFAP04085 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PDGFAP04085 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.12■□□□□ 0.65
PDGFAP04085 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 C1QBPP2-201ENST00000528754 825 ntBASIC19.12■□□□□ 0.65
PDGFAP04085 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.12■□□□□ 0.65
PDGFAP04085 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.12■□□□□ 0.65
PDGFAP04085 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.12■□□□□ 0.65
PDGFAP04085 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDGFAP04085 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.12■□□□□ 0.65
PDGFAP04085 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.11■□□□□ 0.65
PDGFAP04085 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PDGFAP04085 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDGFAP04085 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.11■□□□□ 0.65
PDGFAP04085 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 PNMA6B-201ENST00000538162 1200 ntBASIC19.11■□□□□ 0.65
PDGFAP04085 AC100791.3-201ENST00000617619 330 ntBASIC19.11■□□□□ 0.65
PDGFAP04085 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.11■□□□□ 0.65
PDGFAP04085 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDGFAP04085 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDGFAP04085 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
PDGFAP04085 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms