Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN3O60637 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.18■□□□□ 0.98
TSPAN3O60637 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TSPAN3O60637 TMEM191A-211ENST00000637163 1067 ntBASIC21.18■□□□□ 0.98
TSPAN3O60637 MYC-209ENST00000641252 345 ntBASIC21.18■□□□□ 0.98
TSPAN3O60637 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TSPAN3O60637 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.18■□□□□ 0.98
TSPAN3O60637 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.18■□□□□ 0.98
TSPAN3O60637 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN3O60637 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.18■□□□□ 0.98
TSPAN3O60637 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TSPAN3O60637 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN3O60637 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN3O60637 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.18■□□□□ 0.98
TSPAN3O60637 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TSPAN3O60637 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 FEM1AP4-201ENST00000443167 1987 ntBASIC21.17■□□□□ 0.98
TSPAN3O60637 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.17■□□□□ 0.98
TSPAN3O60637 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.17■□□□□ 0.98
TSPAN3O60637 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TSPAN3O60637 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.17■□□□□ 0.98
TSPAN3O60637 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.17■□□□□ 0.98
TSPAN3O60637 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TSPAN3O60637 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.17■□□□□ 0.98
TSPAN3O60637 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN3O60637 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.17■□□□□ 0.98
TSPAN3O60637 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TSPAN3O60637 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN3O60637 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN3O60637 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN3O60637 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN3O60637 AL049796.1-201ENST00000565336 1766 ntBASIC21.16■□□□□ 0.98
TSPAN3O60637 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.16■□□□□ 0.98
TSPAN3O60637 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN3O60637 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN3O60637 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.16■□□□□ 0.98
TSPAN3O60637 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN3O60637 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN3O60637 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN3O60637 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN3O60637 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.16■□□□□ 0.98
TSPAN3O60637 AL589743.5-201ENST00000616611 1050 ntBASIC21.16■□□□□ 0.98
TSPAN3O60637 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TSPAN3O60637 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TSPAN3O60637 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
TSPAN3O60637 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN3O60637 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN3O60637 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.15■□□□□ 0.98
TSPAN3O60637 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN3O60637 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.15■□□□□ 0.98
TSPAN3O60637 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.15■□□□□ 0.98
TSPAN3O60637 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.15■□□□□ 0.98
TSPAN3O60637 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN3O60637 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.15■□□□□ 0.98
TSPAN3O60637 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.15■□□□□ 0.98
TSPAN3O60637 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN3O60637 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TSPAN3O60637 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.15■□□□□ 0.98
TSPAN3O60637 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.14■□□□□ 0.98
TSPAN3O60637 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN3O60637 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN3O60637 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN3O60637 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN3O60637 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TSPAN3O60637 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN3O60637 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN3O60637 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN3O60637 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TSPAN3O60637 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TSPAN3O60637 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.14■□□□□ 0.97
TSPAN3O60637 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.14■□□□□ 0.97
TSPAN3O60637 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.14■□□□□ 0.97
TSPAN3O60637 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TSPAN3O60637 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN3O60637 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TSPAN3O60637 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.14■□□□□ 0.97
TSPAN3O60637 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TSPAN3O60637 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TSPAN3O60637 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN3O60637 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN3O60637 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.13■□□□□ 0.97
TSPAN3O60637 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms