Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPTLC1O15269 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPTLC1O15269 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
SPTLC1O15269 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.01■■□□□ 1.11
SPTLC1O15269 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.01■■□□□ 1.11
SPTLC1O15269 AC097658.1-201ENST00000475555 843 ntBASIC22.01■■□□□ 1.11
SPTLC1O15269 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.01■■□□□ 1.11
SPTLC1O15269 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.01■■□□□ 1.11
SPTLC1O15269 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPTLC1O15269 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22■■□□□ 1.11
SPTLC1O15269 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPTLC1O15269 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SPTLC1O15269 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22■■□□□ 1.11
SPTLC1O15269 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22■■□□□ 1.11
SPTLC1O15269 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SPTLC1O15269 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPTLC1O15269 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPTLC1O15269 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
SPTLC1O15269 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPTLC1O15269 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22■■□□□ 1.11
SPTLC1O15269 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22■■□□□ 1.11
SPTLC1O15269 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22■■□□□ 1.11
SPTLC1O15269 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SPTLC1O15269 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPTLC1O15269 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPTLC1O15269 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22■■□□□ 1.11
SPTLC1O15269 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22■■□□□ 1.11
SPTLC1O15269 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SPTLC1O15269 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPTLC1O15269 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPTLC1O15269 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPTLC1O15269 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.99■■□□□ 1.11
SPTLC1O15269 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPTLC1O15269 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SPTLC1O15269 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
SPTLC1O15269 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.99■■□□□ 1.11
SPTLC1O15269 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.99■■□□□ 1.11
SPTLC1O15269 ITM2C-210ENST00000620962 501 ntBASIC21.99■■□□□ 1.11
SPTLC1O15269 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPTLC1O15269 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPTLC1O15269 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SPTLC1O15269 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
SPTLC1O15269 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.99■■□□□ 1.11
SPTLC1O15269 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.99■■□□□ 1.11
SPTLC1O15269 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.98■■□□□ 1.11
SPTLC1O15269 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPTLC1O15269 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SPTLC1O15269 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.98■■□□□ 1.11
SPTLC1O15269 POU5F1P3-201ENST00000428824 1078 ntBASIC21.98■■□□□ 1.11
SPTLC1O15269 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.98■■□□□ 1.11
SPTLC1O15269 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.98■■□□□ 1.11
SPTLC1O15269 AL589743.5-201ENST00000616611 1050 ntBASIC21.98■■□□□ 1.11
SPTLC1O15269 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SPTLC1O15269 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPTLC1O15269 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.98■■□□□ 1.11
SPTLC1O15269 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SPTLC1O15269 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SPTLC1O15269 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.97■■□□□ 1.11
SPTLC1O15269 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.97■■□□□ 1.11
SPTLC1O15269 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.97■■□□□ 1.11
SPTLC1O15269 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SPTLC1O15269 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.97■■□□□ 1.11
SPTLC1O15269 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.97■■□□□ 1.11
SPTLC1O15269 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.97■■□□□ 1.11
SPTLC1O15269 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.97■■□□□ 1.11
SPTLC1O15269 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPTLC1O15269 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPTLC1O15269 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SPTLC1O15269 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SPTLC1O15269 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.96■■□□□ 1.11
SPTLC1O15269 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SPTLC1O15269 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPTLC1O15269 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.96■■□□□ 1.11
SPTLC1O15269 RNA5SP413-201ENST00000516373 109 ntBASIC21.96■■□□□ 1.11
SPTLC1O15269 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.96■■□□□ 1.11
SPTLC1O15269 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.96■■□□□ 1.11
SPTLC1O15269 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.96■■□□□ 1.11
SPTLC1O15269 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.96■■□□□ 1.11
SPTLC1O15269 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPTLC1O15269 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPTLC1O15269 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SPTLC1O15269 AC087633.2-202ENST00000565166 1439 ntBASIC21.96■■□□□ 1.11
SPTLC1O15269 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SPTLC1O15269 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SPTLC1O15269 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPTLC1O15269 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SPTLC1O15269 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SPTLC1O15269 KRT18P29-201ENST00000397031 1267 ntBASIC21.95■■□□□ 1.1
SPTLC1O15269 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.95■■□□□ 1.1
SPTLC1O15269 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SPTLC1O15269 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms