Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SURF4O15260 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
SURF4O15260 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SURF4O15260 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SURF4O15260 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SURF4O15260 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.51■□□□□ 0.55
SURF4O15260 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 AC092720.2-201ENST00000602388 1665 ntBASIC18.51■□□□□ 0.55
SURF4O15260 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.51■□□□□ 0.55
SURF4O15260 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.51■□□□□ 0.55
SURF4O15260 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.51■□□□□ 0.55
SURF4O15260 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SURF4O15260 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.51■□□□□ 0.55
SURF4O15260 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.51■□□□□ 0.55
SURF4O15260 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.51■□□□□ 0.55
SURF4O15260 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.51■□□□□ 0.55
SURF4O15260 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SURF4O15260 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SURF4O15260 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SURF4O15260 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.5■□□□□ 0.55
SURF4O15260 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.5■□□□□ 0.55
SURF4O15260 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SURF4O15260 IRS3P-201ENST00000223076 1006 ntBASIC18.5■□□□□ 0.55
SURF4O15260 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.5■□□□□ 0.55
SURF4O15260 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
SURF4O15260 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SURF4O15260 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.5■□□□□ 0.55
SURF4O15260 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.5■□□□□ 0.55
SURF4O15260 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SURF4O15260 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.49■□□□□ 0.55
SURF4O15260 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SURF4O15260 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SURF4O15260 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.49■□□□□ 0.55
SURF4O15260 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.49■□□□□ 0.55
SURF4O15260 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SURF4O15260 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SURF4O15260 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.49■□□□□ 0.55
SURF4O15260 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.49■□□□□ 0.55
SURF4O15260 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SURF4O15260 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SURF4O15260 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SURF4O15260 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.49■□□□□ 0.55
SURF4O15260 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SURF4O15260 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.49■□□□□ 0.55
SURF4O15260 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SURF4O15260 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SURF4O15260 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.49■□□□□ 0.55
SURF4O15260 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.49■□□□□ 0.55
SURF4O15260 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SURF4O15260 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SURF4O15260 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SURF4O15260 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SURF4O15260 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.48■□□□□ 0.55
SURF4O15260 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SURF4O15260 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.48■□□□□ 0.55
SURF4O15260 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SURF4O15260 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.48■□□□□ 0.55
SURF4O15260 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SURF4O15260 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SURF4O15260 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.48■□□□□ 0.55
SURF4O15260 AC012414.1-201ENST00000556676 535 ntBASIC18.48■□□□□ 0.55
SURF4O15260 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.48■□□□□ 0.55
SURF4O15260 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SURF4O15260 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.48■□□□□ 0.55
SURF4O15260 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
SURF4O15260 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.48■□□□□ 0.55
SURF4O15260 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SURF4O15260 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SURF4O15260 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SURF4O15260 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
SURF4O15260 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SURF4O15260 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SURF4O15260 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.47■□□□□ 0.55
SURF4O15260 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.47■□□□□ 0.55
SURF4O15260 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.47■□□□□ 0.55
SURF4O15260 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SURF4O15260 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SURF4O15260 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SURF4O15260 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SURF4O15260 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms