Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TAF4O00268 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TAF4O00268 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TAF4O00268 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TAF4O00268 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.03■□□□□ 0.8
TAF4O00268 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TAF4O00268 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.03■□□□□ 0.8
TAF4O00268 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.03■□□□□ 0.8
TAF4O00268 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TAF4O00268 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.03■□□□□ 0.8
TAF4O00268 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TAF4O00268 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TAF4O00268 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TAF4O00268 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.03■□□□□ 0.8
TAF4O00268 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TAF4O00268 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TAF4O00268 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.02■□□□□ 0.8
TAF4O00268 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TAF4O00268 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.02■□□□□ 0.8
TAF4O00268 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.02■□□□□ 0.8
TAF4O00268 KRT18P35-201ENST00000510488 1269 ntBASIC20.02■□□□□ 0.8
TAF4O00268 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TAF4O00268 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF4O00268 AC092667.1-201ENST00000434301 2586 ntBASIC20.02■□□□□ 0.8
TAF4O00268 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TAF4O00268 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
TAF4O00268 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
TAF4O00268 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TAF4O00268 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.01■□□□□ 0.79
TAF4O00268 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 AC079630.1-202ENST00000618127 1840 ntBASIC20.01■□□□□ 0.79
TAF4O00268 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TAF4O00268 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TAF4O00268 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TAF4O00268 C11orf96-202ENST00000528572 1834 ntBASIC20■□□□□ 0.79
TAF4O00268 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TAF4O00268 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TAF4O00268 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TAF4O00268 FXN-202ENST00000396364 980 ntTSL 5 BASIC20■□□□□ 0.79
TAF4O00268 TSPY7P-201ENST00000431358 1114 ntBASIC20■□□□□ 0.79
TAF4O00268 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
TAF4O00268 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20■□□□□ 0.79
TAF4O00268 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20■□□□□ 0.79
TAF4O00268 EEF1DP3-203ENST00000566025 782 ntBASIC20■□□□□ 0.79
TAF4O00268 AC233263.1-201ENST00000578059 224 ntBASIC20■□□□□ 0.79
TAF4O00268 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20■□□□□ 0.79
TAF4O00268 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
TAF4O00268 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20■□□□□ 0.79
TAF4O00268 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TAF4O00268 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20■□□□□ 0.79
TAF4O00268 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20■□□□□ 0.79
TAF4O00268 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20■□□□□ 0.79
TAF4O00268 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TAF4O00268 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TAF4O00268 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TAF4O00268 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20■□□□□ 0.79
TAF4O00268 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TAF4O00268 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20■□□□□ 0.79
TAF4O00268 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TAF4O00268 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
TAF4O00268 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TAF4O00268 AC087499.1-201ENST00000418141 1075 ntBASIC19.99■□□□□ 0.79
TAF4O00268 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TAF4O00268 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.99■□□□□ 0.79
TAF4O00268 TSPY15P-201ENST00000457163 923 ntBASIC19.99■□□□□ 0.79
TAF4O00268 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.99■□□□□ 0.79
TAF4O00268 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.99■□□□□ 0.79
TAF4O00268 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.99■□□□□ 0.79
TAF4O00268 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.99■□□□□ 0.79
TAF4O00268 AC012306.2-201ENST00000609350 630 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms