Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.45■■□□□ 1.03
YJEFN3A6XGL0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
YJEFN3A6XGL0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
YJEFN3A6XGL0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 AC006128.1-201ENST00000624704 1661 ntBASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
YJEFN3A6XGL0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 KRT18P68-201ENST00000392293 1000 ntBASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 AC087633.2-202ENST00000565166 1439 ntBASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
YJEFN3A6XGL0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 AC092118.2-201ENST00000613495 667 ntBASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
YJEFN3A6XGL0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 MIR4758-201ENST00000577688 71 ntBASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
YJEFN3A6XGL0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 LSM12P1-201ENST00000411836 588 ntBASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 AC069152.1-201ENST00000438030 544 ntBASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 MIR2861-201ENST00000636310 90 ntBASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.41■■□□□ 1.02
YJEFN3A6XGL0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
YJEFN3A6XGL0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
YJEFN3A6XGL0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
YJEFN3A6XGL0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
YJEFN3A6XGL0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms