Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	YJR023C	YJR023C	402 nt		3.94	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SOD1	YJR104C	465 nt		3.94	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YMR194C-A	YMR194C-A	225 nt		3.94	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	EGD1	YPL037C	474 nt		3.94	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YBR064W	YBR064W	429 nt		3.94	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	MGR1	YCL044C	1254 nt		3.94	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	BNA4	YBL098W	1383 nt		3.93	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YGR174W-A	YGR174W-A	87 nt		3.93	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YOR008C-A	YOR008C-A	225 nt		3.93	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YOR050C	YOR050C	348 nt		3.93	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	PRP22	YER013W	3438 nt		3.93	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	ATP25	YMR098C	1839 nt		3.93	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	FLO9	YAL063C	3969 nt		3.93	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SEA4	YBL104C	3117 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YDR061W	YDR061W	1620 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SCW11	YGL028C	1629 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YLL032C	YLL032C	2478 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SPC19	YDR201W	498 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	STE14	YDR410C	720 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YPL142C	YPL142C	318 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	NPR2	YEL062W	1848 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YKU70	YMR284W	1809 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SPC105	YGL093W	2754 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	FAS1	YKL182W	6156 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	MDM32	YOR147W	1869 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	APE2	YKL157W	2859 nt		3.92	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	PHO81	YGR233C	3537 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	PEX5	YDR244W	1839 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	DPB11	YJL090C	2295 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	RPS0A	YGR214W	759 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	FRT2	YAL028W	1587 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YJR140W-A	YJR140W-A	150 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	LCL2	YLR104W	396 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	FOX2	YKR009C	2703 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	SWH1	YAR042W	3567 nt		3.91	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	MSK1	YNL073W	1731 nt		3.9	□□□□□ -1.78
TY4B-P	A0A0B7P3V8	YMR230W-A	YMR230W-A	189 nt		3.9	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	CBP2	YHL038C	1893 nt		3.9	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	MVP1	YMR004W	1536 nt		3.9	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	SRB4	YER022W	2064 nt		3.9	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	DNM1	YLL001W	2274 nt		3.9	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	ELM1	YKL048C	1923 nt		3.89	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YDL242W	YDL242W	354 nt		3.89	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	DAD4	YDR320C-A	219 nt		3.89	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	PAU13	YHL046C	363 nt		3.89	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	STN1	YDR082W	1485 nt		3.89	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	RPB2	YOR151C	3675 nt		3.89	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	SPT6	YGR116W	4356 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	MES1	YGR264C	2256 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	snR55	snR55	98 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	ARF1	YDL192W	546 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YDR250C	YDR250C	276 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YER088C-A	YER088C-A	324 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YFL065C	YFL065C	309 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	RPS23A	YGR118W	438 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YJL135W	YJL135W	318 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	RPS23B	YPR132W	438 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	STU1	YBL034C	4542 nt		3.88	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	ZDS1	YMR273C	2748 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	ARG5,6	YER069W	2592 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YGL052W	YGL052W	306 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	tL(UAG)J	tL(UAG)J	82 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	tL(UAG)L1	tL(UAG)L1	82 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	tL(UAG)L2	tL(UAG)L2	82 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YLR416C	YLR416C	399 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	RPS7A	YOR096W	573 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YBR137W	YBR137W	540 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YLR352W	YLR352W	2424 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	PRP39	YML046W	1890 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	DBP6	YNR038W	1890 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YGR027W-B	YGR027W-B	5268 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YLR227W-B	YLR227W-B	5268 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YPR158C-D	YPR158C-D	5268 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YHR078W	YHR078W	1659 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	SQS1	YNL224C	2304 nt		3.87	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	SGO1	YOR073W	1773 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YDR048C	YDR048C	315 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	RPL14B	YHL001W	417 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	GTT2	YLL060C	702 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	PAU23	YLR037C	375 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	RPS22B	YLR367W	393 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YOR072W-A	YOR072W-A	249 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	HBT1	YDL223C	3141 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	ALY1	YKR021W	2748 nt		3.86	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	VIK1	YPL253C	1944 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	COX1	Q0045	1605 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	NUP60	YAR002W	1620 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	CSN9	YDR179C	489 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YDR246W-A	YDR246W-A	201 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	MF(ALPHA)1	YPL187W	498 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YBR197C	YBR197C	654 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YGR237C	YGR237C	2358 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	SRP72	YPL210C	1923 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	CWH41	YGL027C	2502 nt		3.85	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YDR524C-A	YDR524C-A	120 nt		3.84	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YGR164W	YGR164W	336 nt		3.84	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	HSK3	YKL138C-A	210 nt		3.84	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YMR141W-A	YMR141W-A	225 nt		3.84	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	YOR302W	YOR302W	78 nt		3.84	□□□□□ -1.79
TY4B-P	A0A0B7P3V8	VIP1	YLR410W	3441 nt		3.84	□□□□□ -1.8

Retrieved 100 of 7,029 protein–RNA pairs in 40.7 ms