Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 SPRY4-AS1-204ENST00000510311 591 ntTSL 4 BASIC8.42□□□□□ -1.06
P04436 IGHVIII-51-1-201ENST00000519403 302 ntBASIC8.42□□□□□ -1.06
P04436 ZNF195-220ENST00000528796 881 ntTSL 5 BASIC8.42□□□□□ -1.06
P04436 IZUMO3-202ENST00000543880 1229 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
P04436 UBC-213ENST00000546120 718 ntTSL 5 BASIC8.42□□□□□ -1.06
P04436 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC8.42□□□□□ -1.06
P04436 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.42□□□□□ -1.06
P04436 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 AC087564.1-201ENST00000569751 456 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 AC018521.3-201ENST00000581213 816 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC8.42□□□□□ -1.06
P04436 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC8.42□□□□□ -1.06
P04436 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 AC022149.1-201ENST00000596032 609 ntBASIC8.42□□□□□ -1.06
P04436 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 NDE1P2-201ENST00000605569 1105 ntBASIC8.42□□□□□ -1.06
P04436 AC007450.2-201ENST00000614160 290 ntBASIC8.42□□□□□ -1.06
P04436 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC8.42□□□□□ -1.06
P04436 LINC00581-201ENST00000630914 990 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 AP000787.3-201ENST00000634407 307 ntBASIC8.42□□□□□ -1.06
P04436 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 PLSCR4-210ENST00000493382 1375 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
P04436 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 AC090061.1-202ENST00000502102 1449 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 AC027045.2-201ENST00000634974 1571 ntTSL 5 BASIC8.42□□□□□ -1.06
P04436 UTS2-203ENST00000377516 1601 ntTSL 5 BASIC8.42□□□□□ -1.06
P04436 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 RPL23AP7-202ENST00000416673 2078 ntTSL 2 BASIC8.42□□□□□ -1.06
P04436 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC8.42□□□□□ -1.06
P04436 HADHAP1-201ENST00000514498 2284 ntBASIC8.42□□□□□ -1.06
P04436 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC8.42□□□□□ -1.06
P04436 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
P04436 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.42□□□□□ -1.06
P04436 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC8.41□□□□□ -1.06
P04436 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
P04436 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC8.41□□□□□ -1.06
P04436 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
P04436 CU634019.3-201ENST00000623962 2456 ntBASIC8.41□□□□□ -1.06
P04436 FP236315.2-201ENST00000624506 2456 ntBASIC8.41□□□□□ -1.06
P04436 FP671120.2-201ENST00000624806 2456 ntBASIC8.41□□□□□ -1.06
P04436 LINC01411-203ENST00000507361 2098 ntTSL 3 BASIC8.41□□□□□ -1.06
P04436 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
P04436 F11-202ENST00000264692 1916 ntTSL 2 BASIC8.41□□□□□ -1.06
P04436 HSPA8P16-201ENST00000454171 1865 ntBASIC8.41□□□□□ -1.06
P04436 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 NPIPB10P-201ENST00000424293 1354 ntBASIC8.41□□□□□ -1.06
P04436 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC8.41□□□□□ -1.06
P04436 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC8.41□□□□□ -1.06
P04436 RNU1-120P-201ENST00000363009 157 ntBASIC8.41□□□□□ -1.06
P04436 TCEANC2-202ENST00000371331 936 ntTSL 2 BASIC8.41□□□□□ -1.06
P04436 GCNT1P1-201ENST00000416567 1295 ntBASIC8.41□□□□□ -1.06
P04436 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC8.41□□□□□ -1.06
P04436 LINC02020-204ENST00000435548 604 ntTSL 4 BASIC8.41□□□□□ -1.06
P04436 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC8.41□□□□□ -1.06
P04436 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC8.41□□□□□ -1.06
P04436 AC074121.1-201ENST00000441836 348 ntBASIC8.41□□□□□ -1.06
P04436 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC8.41□□□□□ -1.06
P04436 TSSK1A-201ENST00000450724 768 ntBASIC8.41□□□□□ -1.06
P04436 C3orf67-AS1-201ENST00000463703 562 ntTSL 4 BASIC8.41□□□□□ -1.06
P04436 RN7SL541P-201ENST00000464317 283 ntBASIC8.41□□□□□ -1.06
P04436 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC8.41□□□□□ -1.06
P04436 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC8.41□□□□□ -1.06
P04436 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC8.41□□□□□ -1.06
P04436 AL645949.1-201ENST00000510094 324 ntBASIC8.41□□□□□ -1.06
P04436 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC8.41□□□□□ -1.06
P04436 WT1-AS-206ENST00000525436 1254 ntTSL 5 BASIC8.41□□□□□ -1.06
P04436 OR4B2P-201ENST00000527724 882 ntBASIC8.41□□□□□ -1.06
P04436 GABARAPL1-214ENST00000545047 559 ntTSL 4 BASIC8.41□□□□□ -1.06
P04436 LINC02328-201ENST00000553668 741 ntTSL 3 BASIC8.41□□□□□ -1.06
P04436 SCML2P1-201ENST00000584511 1100 ntBASIC8.41□□□□□ -1.06
P04436 PSG10P-202ENST00000597171 1283 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 ZNF85-208ENST00000597314 563 ntTSL 4 BASIC8.41□□□□□ -1.06
P04436 ZNF675-207ENST00000600313 543 ntTSL 4 BASIC8.41□□□□□ -1.06
P04436 PCBP1-AS1-260ENST00000602091 959 ntTSL 5 BASIC8.41□□□□□ -1.06
P04436 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC8.41□□□□□ -1.06
P04436 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC8.41□□□□□ -1.06
P04436 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC8.41□□□□□ -1.06
P04436 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 AP004782.1-201ENST00000623990 3433 ntBASIC8.41□□□□□ -1.06
P04436 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC8.41□□□□□ -1.06
P04436 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 SLC7A3-201ENST00000298085 2235 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
P04436 UPRT-202ENST00000373379 2234 ntTSL 2 BASIC8.41□□□□□ -1.06
P04436 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
P04436 TBC1D13-201ENST00000223865 3378 ntTSL 2 BASIC8.41□□□□□ -1.06
P04436 LSMEM1-201ENST00000312849 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
P04436 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
P04436 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms