Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TTI2-206ENST00000613904 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 WEE2-AS1-209ENST00000488785 2262 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 TNNT3-208ENST00000397301 818 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AL591686.1-201ENST00000421878 766 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 LINC01006-203ENST00000425712 661 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 ELOA-AS1-201ENST00000427796 1074 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AL158819.1-202ENST00000440645 447 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AC104772.1-201ENST00000444764 862 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 RN7SL359P-201ENST00000473502 288 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 RN7SL236P-201ENST00000484759 284 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 ZFAT-AS1-201ENST00000505776 939 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 EGFLAM-207ENST00000506135 889 ntTSL 3 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AC103982.1-201ENST00000561358 571 ntTSL 4 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 SCML2P1-201ENST00000584511 1100 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 ZNF350-AS1-201ENST00000595010 698 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AC022149.1-201ENST00000596032 609 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AL137002.1-201ENST00000600642 182 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 HINT1P2-201ENST00000604731 235 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 NPIPB2-207ENST00000620285 1216 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AC005796.1-201ENST00000623214 433 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 BCAS3-233ENST00000626960 227 ntTSL 5 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 LINC01835-203ENST00000639800 567 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 FTO-217ENST00000637001 1609 ntTSL 5 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 TMEM255A-201ENST00000309720 3394 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 GDF9-206ENST00000624492 1823 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 AC090616.7-201ENST00000625123 2179 ntBASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 FNDC3A-201ENST00000378383 2037 ntTSL 2 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 SLC22A24-202ENST00000417740 2098 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 IL24-201ENST00000294984 1701 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
NPIPA3F8WFD2 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC112206.2-203ENST00000513234 1556 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 MGAM2-203ENST00000550469 1591 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 PDE4DIPP1-201ENST00000420737 1641 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 TMEM45B-202ENST00000524567 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 HIGD1B-201ENST00000253410 635 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 OR51I2-201ENST00000341449 1070 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 RPL35-202ENST00000373570 493 ntTSL 3 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 DMKN-205ENST00000414866 867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AKR1B1P1-201ENST00000429105 956 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 HLA-T-206ENST00000429813 450 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AL513122.2-201ENST00000437135 838 ntTSL 3 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 RPL5P26-201ENST00000438138 877 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AL008627.1-201ENST00000446953 486 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC092620.1-201ENST00000453636 680 ntTSL 3 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 RN7SL566P-201ENST00000467650 296 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC091152.1-201ENST00000472109 838 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 RN7SL520P-201ENST00000474110 286 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC010307.2-202ENST00000502776 570 ntTSL 4 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC055753.1-201ENST00000510575 889 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 KRTAP9-12P-201ENST00000514388 532 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC120042.1-201ENST00000524309 550 ntTSL 5 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC090531.1-201ENST00000547168 923 ntTSL 3 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 ASB9P1-201ENST00000557146 793 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC011939.1-201ENST00000567680 964 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC087164.1-201ENST00000577847 513 ntTSL 3 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC005154.1-230ENST00000578994 644 ntTSL 4 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 RN7SL155P-201ENST00000581538 263 ntBASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC093330.1-204ENST00000582763 396 ntTSL 5 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 FAM95B1-204ENST00000586273 798 ntTSL 5 BASIC8.48□□□□□ -1.05
NPIPA3F8WFD2 FAM95B1-207ENST00000589112 768 ntTSL 5 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms