Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL024509.1-201ENST00000397093 927 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC9.84□□□□□ -0.83
MTHFRP42898 Z98751.1-201ENST00000413827 381 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 AL161447.1-201ENST00000427811 230 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC9.84□□□□□ -0.83
MTHFRP42898 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 MTND6P15-201ENST00000441157 521 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 MTND6P16-201ENST00000504006 520 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 MIR3945HG-202ENST00000511703 729 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 AL158819.1-201ENST00000514681 398 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC9.84□□□□□ -0.83
MTHFRP42898 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC9.84□□□□□ -0.83
MTHFRP42898 KIR3DP1-201ENST00000580853 628 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 PACERR-201ENST00000608917 825 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC9.84□□□□□ -0.83
MTHFRP42898 AL109920.1-201ENST00000632749 415 ntTSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC9.84□□□□□ -0.83
MTHFRP42898 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 DPF3-215ENST00000610283 4520 ntTSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 AK3-204ENST00000611749 4029 ntTSL 4 BASIC9.84□□□□□ -0.83
MTHFRP42898 TSHZ1-201ENST00000322038 4992 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 HSFY1-204ENST00000382856 1374 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 CD302-204ENST00000553424 3866 ntTSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 FRG2C-201ENST00000308062 2078 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
MTHFRP42898 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 AC006946.2-201ENST00000608373 2855 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
MTHFRP42898 AC112206.2-203ENST00000513234 1556 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 RARB-201ENST00000330688 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 STX12-201ENST00000373943 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
MTHFRP42898 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
MTHFRP42898 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 FBXL2-216ENST00000484457 3847 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 GIMAP4-201ENST00000255945 2060 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 DENND1B-201ENST00000235453 2195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 LECT2-201ENST00000274507 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 Z73361.1-201ENST00000423690 612 ntBASIC9.83□□□□□ -0.84
MTHFRP42898 AL358976.1-201ENST00000437555 392 ntBASIC9.83□□□□□ -0.84
MTHFRP42898 AL355149.1-201ENST00000438396 882 ntBASIC9.83□□□□□ -0.84
MTHFRP42898 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 AL109754.1-201ENST00000449270 1036 ntTSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 RN7SL318P-201ENST00000471955 297 ntBASIC9.83□□□□□ -0.84
MTHFRP42898 RN7SL239P-201ENST00000490061 300 ntBASIC9.83□□□□□ -0.84
MTHFRP42898 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 NR1I3-219ENST00000504010 944 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 Z99943.2-201ENST00000507585 266 ntBASIC9.83□□□□□ -0.84
MTHFRP42898 AC114324.2-201ENST00000510435 680 ntTSL 3 BASIC9.83□□□□□ -0.84
MTHFRP42898 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC9.83□□□□□ -0.84
MTHFRP42898 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC9.83□□□□□ -0.84
MTHFRP42898 AC002070.1-201ENST00000537366 693 ntTSL 3 BASIC9.83□□□□□ -0.84
MTHFRP42898 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 AC089984.2-201ENST00000550293 1201 ntBASIC9.83□□□□□ -0.84
MTHFRP42898 LRP1-AS-202ENST00000555461 645 ntTSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 AC093525.3-201ENST00000568040 287 ntTSL 5 BASIC9.83□□□□□ -0.84
MTHFRP42898 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC9.83□□□□□ -0.84
MTHFRP42898 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
MTHFRP42898 AC007608.1-201ENST00000379963 2469 ntTSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 ZP4-202ENST00000611898 2474 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
MTHFRP42898 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC9.83□□□□□ -0.84
MTHFRP42898 AC009163.7-201ENST00000621929 2557 ntBASIC9.83□□□□□ -0.84
MTHFRP42898 TMEM254-205ENST00000372281 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 ITIH5-202ENST00000397146 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 SEZ6L-205ENST00000403121 3078 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
MTHFRP42898 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC9.83□□□□□ -0.84
MTHFRP42898 ZDHHC6-205ENST00000626395 2906 ntTSL 5 BASIC9.83□□□□□ -0.84
MTHFRP42898 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MTHFRP42898 AC133561.2-202ENST00000561642 1301 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
MTHFRP42898 GIMAP5-201ENST00000358647 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MTHFRP42898 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC9.82□□□□□ -0.84
MTHFRP42898 TTLL5-221ENST00000557636 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
MTHFRP42898 AL049840.1-201ENST00000498989 1404 ntTSL 4 BASIC9.82□□□□□ -0.84
MTHFRP42898 C1QTNF7-205ENST00000444304 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MTHFRP42898 DNAJB7-201ENST00000307221 2578 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
MTHFRP42898 CFAP161-201ENST00000286732 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MTHFRP42898 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
MTHFRP42898 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC9.82□□□□□ -0.84
MTHFRP42898 POTEA-202ENST00000522175 1931 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
MTHFRP42898 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms