Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC100791.3-201ENST00000617619 330 ntBASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 AC121338.2-201ENST00000622535 1744 ntBASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.28■■□□□ 1.64
TNFRSF11AQ9Y6Q6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 AC073210.2-201ENST00000430369 194 ntBASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
TNFRSF11AQ9Y6Q6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 MCRIP2P1-201ENST00000394346 511 ntBASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AL121603.2-201ENST00000557373 2117 ntBASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TNFRSF11AQ9Y6Q6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 DUSP5P2-201ENST00000426873 1033 ntBASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TNFRSF11AQ9Y6Q6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AC091874.3-201ENST00000512672 1195 ntBASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AC027702.1-201ENST00000563810 1770 ntBASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 MIR4758-201ENST00000577688 71 ntBASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AC133041.1-202ENST00000642053 222 ntBASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TNFRSF11AQ9Y6Q6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 KRT18P68-201ENST00000392293 1000 ntBASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TNFRSF11AQ9Y6Q6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms