Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 RPS2P4-201ENST00000476944 856 ntBASIC20.08■□□□□ 0.81
SATB2Q9UPW6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.08■□□□□ 0.81
SATB2Q9UPW6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.08■□□□□ 0.8
SATB2Q9UPW6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SATB2Q9UPW6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.8
SATB2Q9UPW6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 AL596275.1-201ENST00000423464 877 ntBASIC20.07■□□□□ 0.8
SATB2Q9UPW6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SATB2Q9UPW6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 LSM12P1-201ENST00000411836 588 ntBASIC20.06■□□□□ 0.8
SATB2Q9UPW6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 AC026366.1-201ENST00000488803 879 ntBASIC20.06■□□□□ 0.8
SATB2Q9UPW6 UNC93B5-201ENST00000530315 699 ntBASIC20.06■□□□□ 0.8
SATB2Q9UPW6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SATB2Q9UPW6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 UNC93B4-201ENST00000505679 747 ntBASIC20.05■□□□□ 0.8
SATB2Q9UPW6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 AP003097.1-201ENST00000530657 1135 ntBASIC20.05■□□□□ 0.8
SATB2Q9UPW6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 AC243732.1-201ENST00000612648 864 ntBASIC20.05■□□□□ 0.8
SATB2Q9UPW6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SATB2Q9UPW6 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 AC061975.6-201ENST00000579045 1553 ntBASIC20.04■□□□□ 0.8
SATB2Q9UPW6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.04■□□□□ 0.8
SATB2Q9UPW6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms