Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA1Q9UND3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 RARRES2P4-201ENST00000514074 484 ntBASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 AL162412.1-201ENST00000567129 965 ntBASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA1Q9UND3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 AL137060.1-201ENST00000618151 2648 ntBASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 AC010980.2-201ENST00000587099 1412 ntBASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 AC066615.1-201ENST00000640911 628 ntBASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA1Q9UND3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 AC097658.1-201ENST00000475555 843 ntBASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA1Q9UND3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.92■□□□□ 0.62
NPIPA1Q9UND3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA1Q9UND3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 KRT18P29-201ENST00000397031 1267 ntBASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NPIPA1Q9UND3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms