Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 AC069236.1-201ENST00000604339 616 ntBASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 OR10C1-204ENST00000622521 1039 ntBASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA4Q9UN74 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 AC008694.1-202ENST00000636953 945 ntBASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PCDHA4Q9UN74 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA4Q9UN74 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 AC133552.2-202ENST00000575694 574 ntBASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA4Q9UN74 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 AC090192.1-201ENST00000517740 490 ntBASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 AC100791.3-201ENST00000617619 330 ntBASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 AC007225.1-201ENST00000566331 1836 ntBASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
PCDHA4Q9UN74 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 CYP21A1P-202ENST00000354927 1481 ntBASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 AC006970.2-201ENST00000450065 779 ntBASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 AC093787.1-201ENST00000450396 207 ntBASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 MIR2861-201ENST00000636310 90 ntBASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PCDHA4Q9UN74 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 FP700111.2-201ENST00000619190 1892 ntBASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 AL512625.2-201ENST00000417533 625 ntBASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA4Q9UN74 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA4Q9UN74 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms