Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH9Q9ULB4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.8■■□□□ 1.08
CDH9Q9ULB4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH9Q9ULB4 AC087633.2-202ENST00000565166 1439 ntBASIC21.8■■□□□ 1.08
CDH9Q9ULB4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH9Q9ULB4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 AC121338.2-201ENST00000622535 1744 ntBASIC21.78■■□□□ 1.08
CDH9Q9ULB4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 PGM5P4-201ENST00000421970 445 ntBASIC21.78■■□□□ 1.08
CDH9Q9ULB4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 CD99P1-205ENST00000527459 561 ntBASIC21.78■■□□□ 1.08
CDH9Q9ULB4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 AC083880.1-201ENST00000608266 535 ntBASIC21.78■■□□□ 1.08
CDH9Q9ULB4 AC105020.6-201ENST00000621523 1217 ntBASIC21.78■■□□□ 1.08
CDH9Q9ULB4 AC026310.3-201ENST00000625186 2373 ntBASIC21.78■■□□□ 1.08
CDH9Q9ULB4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH9Q9ULB4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH9Q9ULB4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDH9Q9ULB4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH9Q9ULB4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH9Q9ULB4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms