Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 AC133552.2-202ENST00000575694 574 ntBASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAJC28Q9NX36 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 ABHD17AP1-201ENST00000358206 933 ntBASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DNAJC28Q9NX36 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.83■□□□□ 0.92
DNAJC28Q9NX36 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
DNAJC28Q9NX36 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DNAJC28Q9NX36 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DNAJC28Q9NX36 FEM1AP1-201ENST00000431297 1995 ntBASIC20.83■□□□□ 0.92
DNAJC28Q9NX36 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
DNAJC28Q9NX36 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.82■□□□□ 0.92
DNAJC28Q9NX36 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 CYP2T1P-201ENST00000432607 1285 ntBASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNAJC28Q9NX36 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 AC068338.2-201ENST00000563278 1430 ntBASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 AL049796.1-201ENST00000565336 1766 ntBASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 POU5F1P4-201ENST00000413175 1085 ntBASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAJC28Q9NX36 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 KRT18P6-201ENST00000555540 1265 ntBASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAJC28Q9NX36 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms