Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DDX47Q9H0S4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.02
DDX47Q9H0S4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX47Q9H0S4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
DDX47Q9H0S4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX47Q9H0S4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DDX47Q9H0S4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 TSPY26P-201ENST00000476365 1326 ntBASIC21.39■■□□□ 1.01
DDX47Q9H0S4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 EEF1DP3-203ENST00000566025 782 ntBASIC21.39■■□□□ 1.01
DDX47Q9H0S4 AC008764.7-201ENST00000593779 1081 ntBASIC21.39■■□□□ 1.01
DDX47Q9H0S4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX47Q9H0S4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 AP004607.4-201ENST00000530158 1459 ntBASIC21.38■■□□□ 1.01
DDX47Q9H0S4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX47Q9H0S4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 AC053503.5-201ENST00000601508 636 ntBASIC21.37■■□□□ 1.01
DDX47Q9H0S4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 TCF3P1-201ENST00000423021 1937 ntBASIC21.37■■□□□ 1.01
DDX47Q9H0S4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX47Q9H0S4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 AC087289.5-201ENST00000586076 3175 ntBASIC21.36■■□□□ 1.01
DDX47Q9H0S4 AC135279.3-201ENST00000610945 1311 ntBASIC21.36■■□□□ 1.01
DDX47Q9H0S4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 AC099791.1-201ENST00000416440 715 ntBASIC21.36■■□□□ 1.01
DDX47Q9H0S4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX47Q9H0S4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 AC092720.2-201ENST00000602388 1665 ntBASIC21.35■■□□□ 1.01
DDX47Q9H0S4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX47Q9H0S4 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.35■■□□□ 1.01
DDX47Q9H0S4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms