Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 AP004607.4-201ENST00000530158 1459 ntBASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 AC099778.1-201ENST00000568593 1911 ntBASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDHD3Q9BSH5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HDHD3Q9BSH5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HDHD3Q9BSH5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HDHD3Q9BSH5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDHD3Q9BSH5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 RASA4CP-201ENST00000424092 1398 ntBASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 EDA-201ENST00000338901 1233 ntBASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 MIR939-201ENST00000401314 82 ntBASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 AC110285.6-201ENST00000617652 491 ntBASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDHD3Q9BSH5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 AL355001.2-201ENST00000620617 1191 ntBASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDHD3Q9BSH5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDHD3Q9BSH5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms