Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 AL031432.3-201ENST00000607698 485 ntBASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 AC008175.2-201ENST00000612840 297 ntBASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPPED1Q9BRF8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPPED1Q9BRF8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.33■□□□□ 0.69
CPPED1Q9BRF8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPPED1Q9BRF8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPPED1Q9BRF8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPPED1Q9BRF8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.33■□□□□ 0.69
CPPED1Q9BRF8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.33■□□□□ 0.69
CPPED1Q9BRF8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 AL354811.1-201ENST00000610286 706 ntBASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 AC110285.6-201ENST00000617652 491 ntBASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 TCF3P1-201ENST00000423021 1937 ntBASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.33■□□□□ 0.68
CPPED1Q9BRF8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 AC008406.3-201ENST00000620001 1374 ntBASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 AL136967.2-201ENST00000623968 743 ntBASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPPED1Q9BRF8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 KRT87P-202ENST00000534226 1464 ntBASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPPED1Q9BRF8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 AC138907.5-202ENST00000569484 235 ntBASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPPED1Q9BRF8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.29■□□□□ 0.68
CPPED1Q9BRF8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.29■□□□□ 0.68
CPPED1Q9BRF8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPPED1Q9BRF8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPPED1Q9BRF8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms