Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC073210.2-201ENST00000430369 194 ntBASIC18.28■□□□□ 0.52
USB1Q9BQ65 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 AC061975.6-201ENST00000579045 1553 ntBASIC18.28■□□□□ 0.52
USB1Q9BQ65 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USB1Q9BQ65 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USB1Q9BQ65 CDV3P1-201ENST00000471403 739 ntBASIC18.27■□□□□ 0.52
USB1Q9BQ65 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.27■□□□□ 0.52
USB1Q9BQ65 AC105036.2-201ENST00000569468 176 ntBASIC18.27■□□□□ 0.52
USB1Q9BQ65 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.27■□□□□ 0.52
USB1Q9BQ65 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.27■□□□□ 0.52
USB1Q9BQ65 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
USB1Q9BQ65 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USB1Q9BQ65 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.27■□□□□ 0.51
USB1Q9BQ65 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.27■□□□□ 0.51
USB1Q9BQ65 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
USB1Q9BQ65 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
USB1Q9BQ65 AC007952.6-201ENST00000573168 2673 ntBASIC18.26■□□□□ 0.51
USB1Q9BQ65 AC003957.1-201ENST00000625108 2673 ntBASIC18.26■□□□□ 0.51
USB1Q9BQ65 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USB1Q9BQ65 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USB1Q9BQ65 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.26■□□□□ 0.51
USB1Q9BQ65 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.26■□□□□ 0.51
USB1Q9BQ65 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USB1Q9BQ65 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USB1Q9BQ65 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
USB1Q9BQ65 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USB1Q9BQ65 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USB1Q9BQ65 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.26■□□□□ 0.51
USB1Q9BQ65 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USB1Q9BQ65 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.26■□□□□ 0.51
USB1Q9BQ65 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.26■□□□□ 0.51
USB1Q9BQ65 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.26■□□□□ 0.51
USB1Q9BQ65 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USB1Q9BQ65 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.26■□□□□ 0.51
USB1Q9BQ65 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USB1Q9BQ65 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USB1Q9BQ65 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
USB1Q9BQ65 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.25■□□□□ 0.51
USB1Q9BQ65 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 CYP2T1P-201ENST00000432607 1285 ntBASIC18.25■□□□□ 0.51
USB1Q9BQ65 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.25■□□□□ 0.51
USB1Q9BQ65 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 MIR4758-201ENST00000577688 71 ntBASIC18.25■□□□□ 0.51
USB1Q9BQ65 AC133041.1-202ENST00000642053 222 ntBASIC18.25■□□□□ 0.51
USB1Q9BQ65 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.25■□□□□ 0.51
USB1Q9BQ65 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.25■□□□□ 0.51
USB1Q9BQ65 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
USB1Q9BQ65 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USB1Q9BQ65 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
USB1Q9BQ65 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.24■□□□□ 0.51
USB1Q9BQ65 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 AL355802.2-201ENST00000402069 882 ntBASIC18.24■□□□□ 0.51
USB1Q9BQ65 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
USB1Q9BQ65 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.24■□□□□ 0.51
USB1Q9BQ65 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.24■□□□□ 0.51
USB1Q9BQ65 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.24■□□□□ 0.51
USB1Q9BQ65 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.24■□□□□ 0.51
USB1Q9BQ65 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USB1Q9BQ65 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USB1Q9BQ65 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USB1Q9BQ65 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USB1Q9BQ65 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USB1Q9BQ65 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USB1Q9BQ65 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USB1Q9BQ65 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USB1Q9BQ65 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 FAM21FP-204ENST00000608637 956 ntBASIC18.23■□□□□ 0.51
USB1Q9BQ65 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.23■□□□□ 0.51
USB1Q9BQ65 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
USB1Q9BQ65 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
USB1Q9BQ65 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms