Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.76■□□□□ 0.43
GFI1Q99684 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GFI1Q99684 EEF1DP3-203ENST00000566025 782 ntBASIC17.76■□□□□ 0.43
GFI1Q99684 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GFI1Q99684 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.76■□□□□ 0.43
GFI1Q99684 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
GFI1Q99684 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFI1Q99684 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFI1Q99684 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFI1Q99684 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.75■□□□□ 0.43
GFI1Q99684 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GFI1Q99684 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.75■□□□□ 0.43
GFI1Q99684 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
GFI1Q99684 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.75■□□□□ 0.43
GFI1Q99684 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.75■□□□□ 0.43
GFI1Q99684 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 IGHV3-19-201ENST00000521488 291 ntBASIC17.75■□□□□ 0.43
GFI1Q99684 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GFI1Q99684 MIR4767-201ENST00000582827 78 ntBASIC17.75■□□□□ 0.43
GFI1Q99684 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.75■□□□□ 0.43
GFI1Q99684 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GFI1Q99684 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.75■□□□□ 0.43
GFI1Q99684 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFI1Q99684 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFI1Q99684 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFI1Q99684 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GFI1Q99684 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GFI1Q99684 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GFI1Q99684 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GFI1Q99684 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.74■□□□□ 0.43
GFI1Q99684 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.74■□□□□ 0.43
GFI1Q99684 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFI1Q99684 AC131281.2-201ENST00000520478 145 ntBASIC17.74■□□□□ 0.43
GFI1Q99684 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.74■□□□□ 0.43
GFI1Q99684 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.74■□□□□ 0.43
GFI1Q99684 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.74■□□□□ 0.43
GFI1Q99684 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.74■□□□□ 0.43
GFI1Q99684 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GFI1Q99684 AP004607.4-201ENST00000530158 1459 ntBASIC17.74■□□□□ 0.43
GFI1Q99684 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.74■□□□□ 0.43
GFI1Q99684 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.74■□□□□ 0.43
GFI1Q99684 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.73■□□□□ 0.43
GFI1Q99684 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
GFI1Q99684 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GFI1Q99684 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GFI1Q99684 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.73■□□□□ 0.43
GFI1Q99684 AC233992.3-201ENST00000607491 485 ntBASIC17.73■□□□□ 0.43
GFI1Q99684 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.73■□□□□ 0.43
GFI1Q99684 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 BX323043.1-201ENST00000641006 1765 ntBASIC17.73■□□□□ 0.43
GFI1Q99684 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.73■□□□□ 0.43
GFI1Q99684 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFI1Q99684 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.72■□□□□ 0.43
GFI1Q99684 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
GFI1Q99684 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GFI1Q99684 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GFI1Q99684 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFI1Q99684 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
GFI1Q99684 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFI1Q99684 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFI1Q99684 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.72■□□□□ 0.43
GFI1Q99684 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.72■□□□□ 0.43
GFI1Q99684 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GFI1Q99684 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GFI1Q99684 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GFI1Q99684 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.72■□□□□ 0.43
GFI1Q99684 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.72■□□□□ 0.43
GFI1Q99684 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.72■□□□□ 0.43
GFI1Q99684 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms