Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.99□□□□□ -0.01
MUC4Q99102 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.99□□□□□ -0.01
MUC4Q99102 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.99□□□□□ -0.01
MUC4Q99102 KRT87P-202ENST00000534226 1464 ntBASIC14.99□□□□□ -0.01
MUC4Q99102 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MUC4Q99102 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MUC4Q99102 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.99□□□□□ -0.01
MUC4Q99102 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
MUC4Q99102 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MUC4Q99102 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MUC4Q99102 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.99□□□□□ -0.01
MUC4Q99102 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.98□□□□□ -0.01
MUC4Q99102 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
MUC4Q99102 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
MUC4Q99102 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.98□□□□□ -0.01
MUC4Q99102 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MUC4Q99102 DUX4L2-201ENST00000561772 1275 ntBASIC14.98□□□□□ -0.01
MUC4Q99102 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.98□□□□□ -0.01
MUC4Q99102 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.98□□□□□ -0.01
MUC4Q99102 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
MUC4Q99102 DUX4L6-201ENST00000626483 1275 ntBASIC14.98□□□□□ -0.01
MUC4Q99102 DUX4L1-201ENST00000627662 1275 ntBASIC14.98□□□□□ -0.01
MUC4Q99102 DUX4L8-201ENST00000629013 1275 ntBASIC14.98□□□□□ -0.01
MUC4Q99102 DUX4L3-201ENST00000630187 1275 ntBASIC14.98□□□□□ -0.01
MUC4Q99102 DUX4L7-201ENST00000630678 1275 ntBASIC14.98□□□□□ -0.01
MUC4Q99102 DUX4L5-201ENST00000630834 1275 ntBASIC14.98□□□□□ -0.01
MUC4Q99102 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.98□□□□□ -0.01
MUC4Q99102 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MUC4Q99102 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
MUC4Q99102 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.98□□□□□ -0.01
MUC4Q99102 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MUC4Q99102 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.98□□□□□ -0.01
MUC4Q99102 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.98□□□□□ -0.01
MUC4Q99102 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.98□□□□□ -0.01
MUC4Q99102 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.98□□□□□ -0.01
MUC4Q99102 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
MUC4Q99102 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.97□□□□□ -0.01
MUC4Q99102 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
MUC4Q99102 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MUC4Q99102 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.97□□□□□ -0.01
MUC4Q99102 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.97□□□□□ -0.01
MUC4Q99102 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
MUC4Q99102 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MUC4Q99102 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MUC4Q99102 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.97□□□□□ -0.01
MUC4Q99102 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MUC4Q99102 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.96□□□□□ -0.01
MUC4Q99102 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MUC4Q99102 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MUC4Q99102 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.96□□□□□ -0.01
MUC4Q99102 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
MUC4Q99102 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.96□□□□□ -0.01
MUC4Q99102 AL162377.1-201ENST00000618844 1793 ntBASIC14.96□□□□□ -0.01
MUC4Q99102 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MUC4Q99102 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MUC4Q99102 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MUC4Q99102 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MUC4Q99102 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.96□□□□□ -0.01
MUC4Q99102 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
MUC4Q99102 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MUC4Q99102 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
MUC4Q99102 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
MUC4Q99102 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
MUC4Q99102 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MUC4Q99102 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms