Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCNX1Q96RV3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCNX1Q96RV3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.2■□□□□ 0.5
PCNX1Q96RV3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCNX1Q96RV3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNX1Q96RV3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCNX1Q96RV3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCNX1Q96RV3 AC239809.2-201ENST00000415381 517 ntBASIC18.2■□□□□ 0.5
PCNX1Q96RV3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.2■□□□□ 0.5
PCNX1Q96RV3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 AC124016.1-201ENST00000609552 612 ntBASIC18.19■□□□□ 0.5
PCNX1Q96RV3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.19■□□□□ 0.5
PCNX1Q96RV3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNX1Q96RV3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 AC127496.7-201ENST00000625110 1798 ntBASIC18.17■□□□□ 0.5
PCNX1Q96RV3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 AL023875.1-201ENST00000640777 796 ntBASIC18.17■□□□□ 0.5
PCNX1Q96RV3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCNX1Q96RV3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 AL135905.2-201ENST00000584934 1404 ntBASIC18.16■□□□□ 0.5
PCNX1Q96RV3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCNX1Q96RV3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms