Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 AC005229.4-201ENST00000610085 2198 ntBASIC21.21■□□□□ 0.99
RPRD1AQ96P16 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 AC121338.2-201ENST00000622535 1744 ntBASIC21.21■□□□□ 0.99
RPRD1AQ96P16 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.21■□□□□ 0.99
RPRD1AQ96P16 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RPRD1AQ96P16 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
RPRD1AQ96P16 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPRD1AQ96P16 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 MIPEPP3-201ENST00000412105 444 ntBASIC21.19■□□□□ 0.98
RPRD1AQ96P16 BX276092.2-201ENST00000417668 665 ntBASIC21.19■□□□□ 0.98
RPRD1AQ96P16 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 AL138781.1-201ENST00000566567 1274 ntBASIC21.19■□□□□ 0.98
RPRD1AQ96P16 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 AC100791.3-201ENST00000617619 330 ntBASIC21.19■□□□□ 0.98
RPRD1AQ96P16 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPRD1AQ96P16 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 MCRIP2P1-201ENST00000394346 511 ntBASIC21.18■□□□□ 0.98
RPRD1AQ96P16 AL355472.2-201ENST00000422958 438 ntBASIC21.18■□□□□ 0.98
RPRD1AQ96P16 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 CYP21A1P-202ENST00000354927 1481 ntBASIC21.18■□□□□ 0.98
RPRD1AQ96P16 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.18■□□□□ 0.98
RPRD1AQ96P16 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RPRD1AQ96P16 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.16■□□□□ 0.98
RPRD1AQ96P16 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms