Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APH1AQ96BI3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 AC011484.1-201ENST00000377652 1995 ntBASIC18.22■□□□□ 0.51
APH1AQ96BI3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 AF106564.1-201ENST00000607058 2553 ntBASIC18.22■□□□□ 0.51
APH1AQ96BI3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 TSPY6P-201ENST00000448518 926 ntBASIC18.22■□□□□ 0.51
APH1AQ96BI3 AC093787.1-201ENST00000450396 207 ntBASIC18.22■□□□□ 0.51
APH1AQ96BI3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 AC104771.1-201ENST00000603335 964 ntBASIC18.22■□□□□ 0.51
APH1AQ96BI3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APH1AQ96BI3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
APH1AQ96BI3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APH1AQ96BI3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.21■□□□□ 0.51
APH1AQ96BI3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.21■□□□□ 0.5
APH1AQ96BI3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 AC100791.3-201ENST00000617619 330 ntBASIC18.2■□□□□ 0.5
APH1AQ96BI3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 AC010980.2-201ENST00000587099 1412 ntBASIC18.2■□□□□ 0.5
APH1AQ96BI3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 AC121338.2-201ENST00000622535 1744 ntBASIC18.2■□□□□ 0.5
APH1AQ96BI3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
APH1AQ96BI3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
APH1AQ96BI3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
APH1AQ96BI3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
APH1AQ96BI3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APH1AQ96BI3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APH1AQ96BI3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APH1AQ96BI3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms