Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 CYP2T3P-201ENST00000601990 817 ntBASIC24.29■■□□□ 1.48
STAG1Q8WVM7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.29■■□□□ 1.48
STAG1Q8WVM7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
STAG1Q8WVM7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 AL355472.2-201ENST00000422958 438 ntBASIC24.27■■□□□ 1.48
STAG1Q8WVM7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
STAG1Q8WVM7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 MIPEPP3-201ENST00000412105 444 ntBASIC24.26■■□□□ 1.47
STAG1Q8WVM7 AC073210.2-201ENST00000430369 194 ntBASIC24.26■■□□□ 1.47
STAG1Q8WVM7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 AC087633.2-202ENST00000565166 1439 ntBASIC24.26■■□□□ 1.47
STAG1Q8WVM7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
STAG1Q8WVM7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 AC006128.1-201ENST00000624704 1661 ntBASIC24.25■■□□□ 1.47
STAG1Q8WVM7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 AC069152.1-201ENST00000438030 544 ntBASIC24.25■■□□□ 1.47
STAG1Q8WVM7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 AC133041.1-202ENST00000642053 222 ntBASIC24.25■■□□□ 1.47
STAG1Q8WVM7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
STAG1Q8WVM7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.24■■□□□ 1.47
STAG1Q8WVM7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.24■■□□□ 1.47
STAG1Q8WVM7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
STAG1Q8WVM7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
STAG1Q8WVM7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
STAG1Q8WVM7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
STAG1Q8WVM7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
STAG1Q8WVM7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms