Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SMARCC2Q8TAQ2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 GABARAPL3-202ENST00000624044 1851 ntBASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SMARCC2Q8TAQ2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 DUX4L16-201ENST00000555130 1264 ntBASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 SLC7A5P1-201ENST00000568957 537 ntBASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 AC092667.1-201ENST00000434301 2586 ntBASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SMARCC2Q8TAQ2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 AC010536.3-201ENST00000620306 533 ntBASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SMARCC2Q8TAQ2 AC027702.1-201ENST00000563810 1770 ntBASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SMARCC2Q8TAQ2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SMARCC2Q8TAQ2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 AC231657.2-201ENST00000624556 255 ntBASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SMARCC2Q8TAQ2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SMARCC2Q8TAQ2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms