Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 MIR935-201ENST00000401179 91 ntBASIC19.24■□□□□ 0.67
NUP43Q8NFH3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 KRT18P5-201ENST00000436075 1291 ntBASIC19.24■□□□□ 0.67
NUP43Q8NFH3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP43Q8NFH3 LINC01521-201ENST00000504184 1943 ntBASIC19.23■□□□□ 0.67
NUP43Q8NFH3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 AC091799.1-201ENST00000422823 811 ntBASIC19.23■□□□□ 0.67
NUP43Q8NFH3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NUP43Q8NFH3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.22■□□□□ 0.67
NUP43Q8NFH3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP43Q8NFH3 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
NUP43Q8NFH3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 AC073314.1-201ENST00000568729 2216 ntBASIC19.21■□□□□ 0.67
NUP43Q8NFH3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 AC137761.2-201ENST00000561729 223 ntBASIC19.21■□□□□ 0.67
NUP43Q8NFH3 AC145350.3-201ENST00000569033 163 ntBASIC19.21■□□□□ 0.67
NUP43Q8NFH3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.21■□□□□ 0.67
NUP43Q8NFH3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 AP005212.1-201ENST00000581547 1997 ntBASIC19.2■□□□□ 0.66
NUP43Q8NFH3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms