Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
C11orf42Q8N5U0 AF106564.1-201ENST00000607058 2553 ntBASIC17.08■□□□□ 0.33
C11orf42Q8N5U0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
C11orf42Q8N5U0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 CNN2P6-201ENST00000439038 900 ntBASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 AC073111.5-205ENST00000641717 521 ntBASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.08■□□□□ 0.32
C11orf42Q8N5U0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 AL049796.1-201ENST00000565336 1766 ntBASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.07■□□□□ 0.32
C11orf42Q8N5U0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 AC091799.1-201ENST00000422823 811 ntBASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C11orf42Q8N5U0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 AC245052.3-201ENST00000450182 901 ntBASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
C11orf42Q8N5U0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 AC007322.4-201ENST00000509611 723 ntBASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.04■□□□□ 0.32
C11orf42Q8N5U0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms