Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.28■■□□□ 1
PHTF2Q8N3S3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.28■■□□□ 1
PHTF2Q8N3S3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.28■■□□□ 1
PHTF2Q8N3S3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PHTF2Q8N3S3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PHTF2Q8N3S3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PHTF2Q8N3S3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.28■■□□□ 1
PHTF2Q8N3S3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.28■■□□□ 1
PHTF2Q8N3S3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.28■■□□□ 1
PHTF2Q8N3S3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 PRORSD1P-201ENST00000295112 541 ntBASIC21.27■■□□□ 1
PHTF2Q8N3S3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 AL355472.2-201ENST00000422958 438 ntBASIC21.27■■□□□ 1
PHTF2Q8N3S3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PHTF2Q8N3S3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.27■■□□□ 1
PHTF2Q8N3S3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.27■■□□□ 1
PHTF2Q8N3S3 AC100791.3-201ENST00000617619 330 ntBASIC21.27■■□□□ 1
PHTF2Q8N3S3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 KRT17P1-201ENST00000399211 1546 ntBASIC21.27■■□□□ 1
PHTF2Q8N3S3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PHTF2Q8N3S3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.27■□□□□ 0.99
PHTF2Q8N3S3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PHTF2Q8N3S3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PHTF2Q8N3S3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PHTF2Q8N3S3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 CYP2T3P-201ENST00000601990 817 ntBASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PHTF2Q8N3S3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.24■□□□□ 0.99
PHTF2Q8N3S3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 KRT18P29-201ENST00000397031 1267 ntBASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 LSM12P1-201ENST00000411836 588 ntBASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 CDV3P1-201ENST00000471403 739 ntBASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PHTF2Q8N3S3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms