Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF135Q8IUD6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 AL355472.2-201ENST00000422958 438 ntBASIC21.81■■□□□ 1.08
RNF135Q8IUD6 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 AC133561.5-201ENST00000635547 218 ntBASIC21.81■■□□□ 1.08
RNF135Q8IUD6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF135Q8IUD6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 PNMA6B-201ENST00000538162 1200 ntBASIC21.8■■□□□ 1.08
RNF135Q8IUD6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 AC243732.1-201ENST00000612648 864 ntBASIC21.8■■□□□ 1.08
RNF135Q8IUD6 AP006587.3-201ENST00000525742 1516 ntBASIC21.8■■□□□ 1.08
RNF135Q8IUD6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF135Q8IUD6 KRT17P2-201ENST00000300992 1314 ntBASIC21.8■■□□□ 1.08
RNF135Q8IUD6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RNF135Q8IUD6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 CLDN5-201ENST00000403084 2357 ntBASIC21.78■■□□□ 1.08
RNF135Q8IUD6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 KRT16P2-201ENST00000414673 1423 ntBASIC21.78■■□□□ 1.08
RNF135Q8IUD6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RNF135Q8IUD6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 TSPY7P-201ENST00000431358 1114 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms