Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC28Q86X40 AC027702.1-201ENST00000563810 1770 ntBASIC18.25■□□□□ 0.51
LRRC28Q86X40 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 AC087289.5-201ENST00000586076 3175 ntBASIC18.24■□□□□ 0.51
LRRC28Q86X40 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 YBX1P1-201ENST00000445822 960 ntBASIC18.24■□□□□ 0.51
LRRC28Q86X40 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 AL020996.1-203ENST00000536896 2307 ntBASIC18.24■□□□□ 0.51
LRRC28Q86X40 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC28Q86X40 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC28Q86X40 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRRC28Q86X40 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC28Q86X40 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 AC123595.1-201ENST00000440769 1046 ntBASIC18.23■□□□□ 0.51
LRRC28Q86X40 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRC28Q86X40 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC28Q86X40 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC28Q86X40 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC28Q86X40 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC28Q86X40 AC020907.5-201ENST00000624372 1936 ntBASIC18.23■□□□□ 0.51
LRRC28Q86X40 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRRC28Q86X40 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC28Q86X40 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC28Q86X40 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC28Q86X40 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.22■□□□□ 0.51
LRRC28Q86X40 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC28Q86X40 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 AC087623.3-201ENST00000607047 1098 ntBASIC18.22■□□□□ 0.51
LRRC28Q86X40 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC28Q86X40 MIR6084-201ENST00000622012 110 ntBASIC18.22■□□□□ 0.51
LRRC28Q86X40 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC28Q86X40 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC28Q86X40 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LRRC28Q86X40 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC28Q86X40 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC28Q86X40 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC28Q86X40 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC28Q86X40 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC28Q86X40 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC28Q86X40 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC28Q86X40 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC28Q86X40 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC28Q86X40 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC28Q86X40 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRRC28Q86X40 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms