Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 AC073314.1-201ENST00000568729 2216 ntBASIC20.2■□□□□ 0.82
SYVN1Q86TM6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYVN1Q86TM6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SYVN1Q86TM6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.2■□□□□ 0.82
SYVN1Q86TM6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.2■□□□□ 0.82
SYVN1Q86TM6 AC061975.6-201ENST00000579045 1553 ntBASIC20.2■□□□□ 0.82
SYVN1Q86TM6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYVN1Q86TM6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYVN1Q86TM6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 AL109923.1-201ENST00000618799 583 ntBASIC20.19■□□□□ 0.82
SYVN1Q86TM6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 AP005212.1-201ENST00000581547 1997 ntBASIC20.19■□□□□ 0.82
SYVN1Q86TM6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYVN1Q86TM6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 MIR663A-201ENST00000385250 93 ntBASIC20.18■□□□□ 0.82
SYVN1Q86TM6 NCF1B-203ENST00000435988 1254 ntBASIC20.18■□□□□ 0.82
SYVN1Q86TM6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYVN1Q86TM6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 MFSD11-216ENST00000590393 1141 ntBASIC20.17■□□□□ 0.82
SYVN1Q86TM6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SYVN1Q86TM6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.16■□□□□ 0.82
SYVN1Q86TM6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYVN1Q86TM6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 GPX1P1-201ENST00000388829 606 ntBASIC20.15■□□□□ 0.82
SYVN1Q86TM6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 AC231657.2-201ENST00000624556 255 ntBASIC20.15■□□□□ 0.82
SYVN1Q86TM6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYVN1Q86TM6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms