Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CYS1Q717R9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYS1Q717R9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.55■□□□□ 0.88
CYS1Q717R9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYS1Q717R9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYS1Q717R9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CYS1Q717R9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.55■□□□□ 0.88
CYS1Q717R9 AC142381.2-201ENST00000566120 298 ntBASIC20.55■□□□□ 0.88
CYS1Q717R9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CYS1Q717R9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYS1Q717R9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CYS1Q717R9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYS1Q717R9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CYS1Q717R9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CYS1Q717R9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CYS1Q717R9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CYS1Q717R9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.54■□□□□ 0.88
CYS1Q717R9 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.54■□□□□ 0.88
CYS1Q717R9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.54■□□□□ 0.88
CYS1Q717R9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CYS1Q717R9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CYS1Q717R9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.54■□□□□ 0.88
CYS1Q717R9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.54■□□□□ 0.88
CYS1Q717R9 AC243732.1-201ENST00000612648 864 ntBASIC20.54■□□□□ 0.88
CYS1Q717R9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
CYS1Q717R9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CYS1Q717R9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 LINC02228-203ENST00000641970 1355 ntBASIC20.54■□□□□ 0.88
CYS1Q717R9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYS1Q717R9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
CYS1Q717R9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYS1Q717R9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.53■□□□□ 0.88
CYS1Q717R9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYS1Q717R9 AL391422.3-201ENST00000603791 2761 ntBASIC20.53■□□□□ 0.88
CYS1Q717R9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
CYS1Q717R9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.53■□□□□ 0.88
CYS1Q717R9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CYS1Q717R9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYS1Q717R9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.53■□□□□ 0.88
CYS1Q717R9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.53■□□□□ 0.88
CYS1Q717R9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.53■□□□□ 0.88
CYS1Q717R9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYS1Q717R9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.53■□□□□ 0.88
CYS1Q717R9 SLC7A5P1-201ENST00000568957 537 ntBASIC20.53■□□□□ 0.88
CYS1Q717R9 CCDC92B-201ENST00000575506 885 ntBASIC20.53■□□□□ 0.88
CYS1Q717R9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.53■□□□□ 0.88
CYS1Q717R9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CYS1Q717R9 TCF3P1-201ENST00000423021 1937 ntBASIC20.53■□□□□ 0.88
CYS1Q717R9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYS1Q717R9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYS1Q717R9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.52■□□□□ 0.88
CYS1Q717R9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CYS1Q717R9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYS1Q717R9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.52■□□□□ 0.88
CYS1Q717R9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYS1Q717R9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYS1Q717R9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.52■□□□□ 0.88
CYS1Q717R9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.52■□□□□ 0.88
CYS1Q717R9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.52■□□□□ 0.88
CYS1Q717R9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CYS1Q717R9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYS1Q717R9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.52■□□□□ 0.88
CYS1Q717R9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CYS1Q717R9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.52■□□□□ 0.87
CYS1Q717R9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CYS1Q717R9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CYS1Q717R9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYS1Q717R9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYS1Q717R9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYS1Q717R9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYS1Q717R9 AFG3L1P-217ENST00000557444 2447 ntBASIC20.51■□□□□ 0.87
CYS1Q717R9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYS1Q717R9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYS1Q717R9 AC123595.1-201ENST00000440769 1046 ntBASIC20.51■□□□□ 0.87
CYS1Q717R9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
CYS1Q717R9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CYS1Q717R9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CYS1Q717R9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.51■□□□□ 0.87
CYS1Q717R9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.51■□□□□ 0.87
CYS1Q717R9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYS1Q717R9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms