Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 AC006557.6-201ENST00000623071 864 ntBASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.32■□□□□ 0.84
LYSMD4Q5XG99 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 AL390719.1-204ENST00000412397 1219 ntBASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 AC133561.5-201ENST00000635547 218 ntBASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.31■□□□□ 0.84
LYSMD4Q5XG99 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.3■□□□□ 0.84
LYSMD4Q5XG99 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
LYSMD4Q5XG99 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 AC113410.3-201ENST00000623366 203 ntBASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.28■□□□□ 0.84
LYSMD4Q5XG99 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 AC087499.1-201ENST00000418141 1075 ntBASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 PRKY-204ENST00000533551 1019 ntBASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 RARRES2P10-201ENST00000564312 460 ntBASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.27■□□□□ 0.84
LYSMD4Q5XG99 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms