Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13DQ5THJ4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VPS13DQ5THJ4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13DQ5THJ4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13DQ5THJ4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13DQ5THJ4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13DQ5THJ4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS13DQ5THJ4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 CYP21A1P-202ENST00000354927 1481 ntBASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 PRKY-204ENST00000533551 1019 ntBASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 KRT8P9-201ENST00000558927 1449 ntBASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13DQ5THJ4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 AC133561.5-201ENST00000635547 218 ntBASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13DQ5THJ4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS13DQ5THJ4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13DQ5THJ4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 AC124283.5-201ENST00000624661 1809 ntBASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 AC087499.1-201ENST00000418141 1075 ntBASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS13DQ5THJ4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms