Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YOL150CYOL150C 312 nt2.45□□□□□ -2.02
RUP1Q12242 VID24YBR105C 1089 nt2.45□□□□□ -2.02
RUP1Q12242 DAD3YBR233W-A 285 nt2.45□□□□□ -2.02
RUP1Q12242 SIP3YNL257C 3690 nt2.45□□□□□ -2.02
RUP1Q12242 SNX41YDR425W 1878 nt2.45□□□□□ -2.02
RUP1Q12242 DNA2YHR164C 4569 nt2.44□□□□□ -2.02
RUP1Q12242 snR70snR70 164 nt2.44□□□□□ -2.02
RUP1Q12242 PEX4YGR133W 552 nt2.44□□□□□ -2.02
RUP1Q12242 YGR228WYGR228W 345 nt2.44□□□□□ -2.02
RUP1Q12242 YHR032W-AYHR032W-A 180 nt2.44□□□□□ -2.02
RUP1Q12242 PEX18YHR160C 852 nt2.44□□□□□ -2.02
RUP1Q12242 RIO2YNL207W 1278 nt2.44□□□□□ -2.02
RUP1Q12242 ISU1YPL135W 498 nt2.44□□□□□ -2.02
RUP1Q12242 YPR153WYPR153W 423 nt2.44□□□□□ -2.02
RUP1Q12242 SSN2YDR443C 4263 nt2.44□□□□□ -2.02
RUP1Q12242 GPI19YDR437W 423 nt2.43□□□□□ -2.02
RUP1Q12242 COG2YGR120C 789 nt2.43□□□□□ -2.02
RUP1Q12242 CSE4YKL049C 690 nt2.43□□□□□ -2.02
RUP1Q12242 ATG38YLR211C 681 nt2.43□□□□□ -2.02
RUP1Q12242 TAP42YMR028W 1101 nt2.43□□□□□ -2.02
RUP1Q12242 RPL36AYMR194W 303 nt2.43□□□□□ -2.02
RUP1Q12242 YNL179CYNL179C 438 nt2.43□□□□□ -2.02
RUP1Q12242 MIX23YBL107C 591 nt2.43□□□□□ -2.02
RUP1Q12242 ARF3YOR094W 552 nt2.43□□□□□ -2.02
RUP1Q12242 RBL2YOR265W 321 nt2.43□□□□□ -2.02
RUP1Q12242 YPL034WYPL034W 498 nt2.43□□□□□ -2.02
RUP1Q12242 YKL075CYKL075C 1353 nt2.43□□□□□ -2.02
RUP1Q12242 RLF2YPR018W 1821 nt2.42□□□□□ -2.02
RUP1Q12242 PDR1YGL013C 3207 nt2.42□□□□□ -2.02
RUP1Q12242 PSD2YGR170W 3417 nt2.42□□□□□ -2.02
RUP1Q12242 NPR1YNL183C 2373 nt2.42□□□□□ -2.02
RUP1Q12242 MES1YGR264C 2256 nt2.42□□□□□ -2.02
RUP1Q12242 OCA6YDR067C 675 nt2.42□□□□□ -2.02
RUP1Q12242 IRC2YDR112W 309 nt2.42□□□□□ -2.02
RUP1Q12242 SLX9YGR081C 633 nt2.42□□□□□ -2.02
RUP1Q12242 YGR293CYGR293C 462 nt2.42□□□□□ -2.02
RUP1Q12242 PRS3YHL011C 963 nt2.42□□□□□ -2.02
RUP1Q12242 CKA1YIL035C 1119 nt2.42□□□□□ -2.02
RUP1Q12242 RGM1YMR182C 636 nt2.42□□□□□ -2.02
RUP1Q12242 COQ10YOL008W 624 nt2.42□□□□□ -2.02
RUP1Q12242 YOL134CYOL134C 390 nt2.42□□□□□ -2.02
RUP1Q12242 ATP3YBR039W 936 nt2.42□□□□□ -2.02
RUP1Q12242 PTP3YER075C 2787 nt2.42□□□□□ -2.02
RUP1Q12242 YDR029WYDR029W 315 nt2.41□□□□□ -2.02
RUP1Q12242 VMA21YGR105W 234 nt2.41□□□□□ -2.02
RUP1Q12242 SCEIQ0160 708 nt2.41□□□□□ -2.02
RUP1Q12242 BUD19YJL188C 309 nt2.41□□□□□ -2.02
RUP1Q12242 YAL026C-AYAL026C-A 438 nt2.41□□□□□ -2.02
RUP1Q12242 YLR302CYLR302C 363 nt2.41□□□□□ -2.02
RUP1Q12242 GMC2YLR445W 567 nt2.41□□□□□ -2.02
RUP1Q12242 ERG29YMR134W 714 nt2.41□□□□□ -2.02
RUP1Q12242 VMA9YCL005W-A 222 nt2.41□□□□□ -2.02
RUP1Q12242 GPI17YDR434W 1605 nt2.41□□□□□ -2.02
RUP1Q12242 GCD10YNL062C 1437 nt2.41□□□□□ -2.02
RUP1Q12242 STE11YLR362W 2154 nt2.4□□□□□ -2.02
RUP1Q12242 GCV2YMR189W 3105 nt2.4□□□□□ -2.02
RUP1Q12242 YIL166CYIL166C 1629 nt2.4□□□□□ -2.03
RUP1Q12242 YDL187CYDL187C 330 nt2.4□□□□□ -2.03
RUP1Q12242 ADK1YDR226W 669 nt2.4□□□□□ -2.03
RUP1Q12242 PRE1YER012W 597 nt2.4□□□□□ -2.03
RUP1Q12242 GLC7YER133W 939 nt2.4□□□□□ -2.03
RUP1Q12242 YHL006W-AYHL006W-A 354 nt2.4□□□□□ -2.03
RUP1Q12242 OTU2YHL013C 924 nt2.4□□□□□ -2.03
RUP1Q12242 YLR271WYLR271W 825 nt2.4□□□□□ -2.03
RUP1Q12242 LSM2YBL026W 288 nt2.4□□□□□ -2.03
RUP1Q12242 YMR304C-AYMR304C-A 351 nt2.4□□□□□ -2.03
RUP1Q12242 HHT2YNL031C 411 nt2.4□□□□□ -2.03
RUP1Q12242 TPS2YDR074W 2691 nt2.4□□□□□ -2.03
RUP1Q12242 YDR239CYDR239C 2364 nt2.39□□□□□ -2.03
RUP1Q12242 RPS17BYDR447C 411 nt2.39□□□□□ -2.03
RUP1Q12242 YOR050CYOR050C 348 nt2.39□□□□□ -2.03
RUP1Q12242 NEW1YPL226W 3591 nt2.39□□□□□ -2.03
RUP1Q12242 RLI1YDR091C 1827 nt2.39□□□□□ -2.03
RUP1Q12242 RRI2YOL117W 1938 nt2.38□□□□□ -2.03
RUP1Q12242 SSF2YDR312W 1362 nt2.38□□□□□ -2.03
RUP1Q12242 YDL009CYDL009C 324 nt2.38□□□□□ -2.03
RUP1Q12242 snR76snR76 109 nt2.38□□□□□ -2.03
RUP1Q12242 AFR1YDR085C 1863 nt2.38□□□□□ -2.03
RUP1Q12242 DFG10YIL049W 762 nt2.38□□□□□ -2.03
RUP1Q12242 SWS2YNL081C 432 nt2.38□□□□□ -2.03
RUP1Q12242 RPL25YOL127W 429 nt2.38□□□□□ -2.03
RUP1Q12242 ACM1YPL267W 630 nt2.38□□□□□ -2.03
RUP1Q12242 PDR3YBL005W 2931 nt2.38□□□□□ -2.03
RUP1Q12242 DNF1YER166W 4716 nt2.37□□□□□ -2.03
RUP1Q12242 YKL023C-AYKL023C-A 228 nt2.37□□□□□ -2.03
RUP1Q12242 VPH2YKL119C 648 nt2.37□□□□□ -2.03
RUP1Q12242 EMC6YLL014W 327 nt2.37□□□□□ -2.03
RUP1Q12242 YOR283WYOR283W 693 nt2.37□□□□□ -2.03
RUP1Q12242 YPR172WYPR172W 603 nt2.37□□□□□ -2.03
RUP1Q12242 VPS13YLL040C 9435 nt2.37□□□□□ -2.03
RUP1Q12242 YNL034WYNL034W 1839 nt2.37□□□□□ -2.03
RUP1Q12242 YPK1YKL126W 2043 nt2.37□□□□□ -2.03
RUP1Q12242 YKU80YMR106C 1890 nt2.37□□□□□ -2.03
RUP1Q12242 AHC2YCR082W 387 nt2.36□□□□□ -2.03
RUP1Q12242 YDL016CYDL016C 303 nt2.36□□□□□ -2.03
RUP1Q12242 YGL165CYGL165C 579 nt2.36□□□□□ -2.03
RUP1Q12242 YGR050CYGR050C 357 nt2.36□□□□□ -2.03
RUP1Q12242 YNL046WYNL046W 519 nt2.36□□□□□ -2.03
RUP1Q12242 OST2YOR103C 393 nt2.36□□□□□ -2.03
RUP1Q12242 TRM7YBR061C 933 nt2.36□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms