Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
PCDH1Q08174 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH1Q08174 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH1Q08174 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
PCDH1Q08174 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDH1Q08174 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH1Q08174 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH1Q08174 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDH1Q08174 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH1Q08174 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH1Q08174 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH1Q08174 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDH1Q08174 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH1Q08174 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH1Q08174 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH1Q08174 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH1Q08174 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH1Q08174 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCDH1Q08174 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDH1Q08174 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH1Q08174 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH1Q08174 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH1Q08174 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDH1Q08174 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH1Q08174 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCDH1Q08174 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDH1Q08174 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH1Q08174 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH1Q08174 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH1Q08174 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH1Q08174 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH1Q08174 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH1Q08174 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PCDH1Q08174 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PCDH1Q08174 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDH1Q08174 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDH1Q08174 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH1Q08174 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH1Q08174 AL162412.1-201ENST00000567129 965 ntBASIC19.81■□□□□ 0.76
PCDH1Q08174 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH1Q08174 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH1Q08174 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDH1Q08174 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH1Q08174 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH1Q08174 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCDH1Q08174 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
PCDH1Q08174 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH1Q08174 TERF1P5-201ENST00000477545 1207 ntBASIC19.8■□□□□ 0.76
PCDH1Q08174 AC007322.4-201ENST00000509611 723 ntBASIC19.8■□□□□ 0.76
PCDH1Q08174 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDH1Q08174 AC010536.3-201ENST00000620306 533 ntBASIC19.8■□□□□ 0.76
PCDH1Q08174 MIR2861-201ENST00000636310 90 ntBASIC19.8■□□□□ 0.76
PCDH1Q08174 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH1Q08174 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDH1Q08174 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH1Q08174 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDH1Q08174 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCDH1Q08174 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDH1Q08174 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH1Q08174 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH1Q08174 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH1Q08174 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH1Q08174 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH1Q08174 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH1Q08174 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH1Q08174 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH1Q08174 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDH1Q08174 AC007322.3-201ENST00000426526 701 ntBASIC19.79■□□□□ 0.76
PCDH1Q08174 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH1Q08174 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PCDH1Q08174 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH1Q08174 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH1Q08174 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDH1Q08174 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDH1Q08174 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.79■□□□□ 0.76
PCDH1Q08174 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH1Q08174 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PCDH1Q08174 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCDH1Q08174 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDH1Q08174 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDH1Q08174 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDH1Q08174 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDH1Q08174 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDH1Q08174 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH1Q08174 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDH1Q08174 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDH1Q08174 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms