Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 KHA1YJL094C 2622 nt3.48□□□□□ -1.85
SSL1Q04673 PHO81YGR233C 3537 nt3.48□□□□□ -1.85
SSL1Q04673 RAD5YLR032W 3510 nt3.48□□□□□ -1.85
SSL1Q04673 ATP25YMR098C 1839 nt3.47□□□□□ -1.85
SSL1Q04673 SLA1YBL007C 3735 nt3.47□□□□□ -1.85
SSL1Q04673 STE14YDR410C 720 nt3.47□□□□□ -1.85
SSL1Q04673 FMP32YFL046W 624 nt3.47□□□□□ -1.85
SSL1Q04673 RAD6YGL058W 519 nt3.47□□□□□ -1.85
SSL1Q04673 RPL1BYGL135W 654 nt3.47□□□□□ -1.85
SSL1Q04673 RPS7BYNL096C 573 nt3.47□□□□□ -1.85
SSL1Q04673 RPL1AYPL220W 654 nt3.47□□□□□ -1.85
SSL1Q04673 BYE1YKL005C 1785 nt3.47□□□□□ -1.85
SSL1Q04673 YKL100CYKL100C 1764 nt3.47□□□□□ -1.85
SSL1Q04673 STU1YBL034C 4542 nt3.47□□□□□ -1.85
SSL1Q04673 VPS53YJL029C 2469 nt3.47□□□□□ -1.85
SSL1Q04673 FAA2YER015W 2235 nt3.46□□□□□ -1.86
SSL1Q04673 CCM1YGR150C 2595 nt3.46□□□□□ -1.86
SSL1Q04673 PEX4YGR133W 552 nt3.46□□□□□ -1.86
SSL1Q04673 NOP19YGR251W 591 nt3.46□□□□□ -1.86
SSL1Q04673 RPL39YJL189W 156 nt3.46□□□□□ -1.86
SSL1Q04673 SRL3YKR091W 741 nt3.46□□□□□ -1.86
SSL1Q04673 RPL23AYBL087C 414 nt3.46□□□□□ -1.86
SSL1Q04673 YPL276WYPL276W 438 nt3.46□□□□□ -1.86
SSL1Q04673 YPR053CYPR053C 456 nt3.46□□□□□ -1.86
SSL1Q04673 JIP5YPR169W 1479 nt3.46□□□□□ -1.86
SSL1Q04673 RAD26YJR035W 3258 nt3.46□□□□□ -1.86
SSL1Q04673 ARO1YDR127W 4767 nt3.46□□□□□ -1.86
SSL1Q04673 VAS1YGR094W 3315 nt3.45□□□□□ -1.86
SSL1Q04673 YEL018C-AYEL018C-A 534 nt3.45□□□□□ -1.86
SSL1Q04673 YER066C-AYER066C-A 501 nt3.45□□□□□ -1.86
SSL1Q04673 YGR107WYGR107W 450 nt3.45□□□□□ -1.86
SSL1Q04673 AIM32YML050W 936 nt3.45□□□□□ -1.86
SSL1Q04673 ROX1YPR065W 1107 nt3.45□□□□□ -1.86
SSL1Q04673 DAN4YJR151C 3486 nt3.45□□□□□ -1.86
SSL1Q04673 MDM32YOR147W 1869 nt3.45□□□□□ -1.86
SSL1Q04673 TAF1YGR274C 3201 nt3.45□□□□□ -1.86
SSL1Q04673 CWC22YGR278W 1734 nt3.44□□□□□ -1.86
SSL1Q04673 MDN1YLR106C 14733 nt3.44□□□□□ -1.86
SSL1Q04673 YDR102CYDR102C 333 nt3.44□□□□□ -1.86
SSL1Q04673 TIF35YDR429C 825 nt3.44□□□□□ -1.86
SSL1Q04673 PAU10YDR542W 363 nt3.44□□□□□ -1.86
SSL1Q04673 PAU11YGL261C 363 nt3.44□□□□□ -1.86
SSL1Q04673 RPS21BYJL136C 264 nt3.44□□□□□ -1.86
SSL1Q04673 YJR023CYJR023C 402 nt3.44□□□□□ -1.86
SSL1Q04673 PET191YJR034W 327 nt3.44□□□□□ -1.86
SSL1Q04673 PAU4YLR461W 363 nt3.44□□□□□ -1.86
SSL1Q04673 DPB11YJL090C 2295 nt3.44□□□□□ -1.86
SSL1Q04673 CIN1YOR349W 3045 nt3.44□□□□□ -1.86
SSL1Q04673 MTC3YGL226W 372 nt3.43□□□□□ -1.86
SSL1Q04673 YKL111CYKL111C 336 nt3.43□□□□□ -1.86
SSL1Q04673 TIR2YOR010C 756 nt3.43□□□□□ -1.86
SSL1Q04673 YPR077CYPR077C 372 nt3.43□□□□□ -1.86
SSL1Q04673 ALA1YOR335C 2877 nt3.43□□□□□ -1.86
SSL1Q04673 SPC72YAL047C 1869 nt3.43□□□□□ -1.86
SSL1Q04673 SPA2YLL021W 4401 nt3.43□□□□□ -1.86
SSL1Q04673 GPI13YLL031C 3054 nt3.42□□□□□ -1.86
SSL1Q04673 ARK1YNL020C 1917 nt3.42□□□□□ -1.86
SSL1Q04673 GSC2YGR032W 5688 nt3.42□□□□□ -1.86
SSL1Q04673 CHS3YBR023C 3498 nt3.42□□□□□ -1.86
SSL1Q04673 RSF2YJR127C 4143 nt3.42□□□□□ -1.86
SSL1Q04673 IRC4YDR540C 540 nt3.42□□□□□ -1.86
SSL1Q04673 YFL032WYFL032W 321 nt3.42□□□□□ -1.86
SSL1Q04673 BCD1YHR040W 1101 nt3.42□□□□□ -1.86
SSL1Q04673 YBL108WYBL108W 306 nt3.42□□□□□ -1.86
SSL1Q04673 GYL1YMR192W 2163 nt3.42□□□□□ -1.86
SSL1Q04673 YPR022CYPR022C 3402 nt3.41□□□□□ -1.86
SSL1Q04673 NDT80YHR124W 1884 nt3.41□□□□□ -1.86
SSL1Q04673 OSH3YHR073W 2991 nt3.41□□□□□ -1.86
SSL1Q04673 CCT7YJL111W 1653 nt3.41□□□□□ -1.86
SSL1Q04673 GPI8YDR331W 1236 nt3.41□□□□□ -1.86
SSL1Q04673 YHR063W-AYHR063W-A 336 nt3.41□□□□□ -1.86
SSL1Q04673 YHR139C-AYHR139C-A 312 nt3.41□□□□□ -1.86
SSL1Q04673 YJR140W-AYJR140W-A 150 nt3.41□□□□□ -1.86
SSL1Q04673 RFC3YNL290W 1023 nt3.41□□□□□ -1.86
SSL1Q04673 PEX11YOL147C 711 nt3.41□□□□□ -1.86
SSL1Q04673 TIM18YOR297C 579 nt3.41□□□□□ -1.86
SSL1Q04673 ISU1YPL135W 498 nt3.41□□□□□ -1.86
SSL1Q04673 YDL180WYDL180W 1644 nt3.41□□□□□ -1.86
SSL1Q04673 SET1YHR119W 3243 nt3.4□□□□□ -1.86
SSL1Q04673 NMA111YNL123W 2994 nt3.4□□□□□ -1.86
SSL1Q04673 STE5YDR103W 2754 nt3.4□□□□□ -1.87
SSL1Q04673 AAD16YFL057C 459 nt3.4□□□□□ -1.87
SSL1Q04673 YAL064W-BYAL064W-B 381 nt3.4□□□□□ -1.87
SSL1Q04673 YMR290W-AYMR290W-A 348 nt3.4□□□□□ -1.87
SSL1Q04673 TRS120YDR407C 3870 nt3.4□□□□□ -1.87
SSL1Q04673 YER188C-AYER188C-A 300 nt3.39□□□□□ -1.87
SSL1Q04673 RPC10YHR143W-A 213 nt3.39□□□□□ -1.87
SSL1Q04673 PAU23YLR037C 375 nt3.39□□□□□ -1.87
SSL1Q04673 YMR320WYMR320W 306 nt3.39□□□□□ -1.87
SSL1Q04673 RPS8AYBL072C 603 nt3.39□□□□□ -1.87
SSL1Q04673 HEM4YOR278W 828 nt3.39□□□□□ -1.87
SSL1Q04673 YPL238CYPL238C 390 nt3.39□□□□□ -1.87
SSL1Q04673 snR36snR36 182 nt3.39□□□□□ -1.87
SSL1Q04673 NUP60YAR002W 1620 nt3.39□□□□□ -1.87
SSL1Q04673 RSC1YGR056W 2787 nt3.38□□□□□ -1.87
SSL1Q04673 SPG3YDR504C 384 nt3.38□□□□□ -1.87
SSL1Q04673 PRE4YFR050C 801 nt3.38□□□□□ -1.87
SSL1Q04673 RPB9YGL070C 369 nt3.38□□□□□ -1.87
SSL1Q04673 PRE8YML092C 753 nt3.38□□□□□ -1.87
SSL1Q04673 VHR2YER064C 1518 nt3.38□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms