Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.19■□□□□ 0.66
RPS3AP61247 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS3AP61247 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.19■□□□□ 0.66
RPS3AP61247 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.19■□□□□ 0.66
RPS3AP61247 KRT87P-202ENST00000534226 1464 ntBASIC19.19■□□□□ 0.66
RPS3AP61247 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RPS3AP61247 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 LETM1P2-201ENST00000597330 2178 ntBASIC19.19■□□□□ 0.66
RPS3AP61247 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RPS3AP61247 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
RPS3AP61247 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS3AP61247 AC026471.1-201ENST00000564629 3026 ntBASIC19.19■□□□□ 0.66
RPS3AP61247 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.18■□□□□ 0.66
RPS3AP61247 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.18■□□□□ 0.66
RPS3AP61247 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.18■□□□□ 0.66
RPS3AP61247 KRT19P1-201ENST00000405746 1186 ntBASIC19.18■□□□□ 0.66
RPS3AP61247 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RPS3AP61247 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.18■□□□□ 0.66
RPS3AP61247 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.18■□□□□ 0.66
RPS3AP61247 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.18■□□□□ 0.66
RPS3AP61247 AP006587.3-201ENST00000525742 1516 ntBASIC19.18■□□□□ 0.66
RPS3AP61247 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.18■□□□□ 0.66
RPS3AP61247 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RPS3AP61247 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS3AP61247 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RPS3AP61247 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.17■□□□□ 0.66
RPS3AP61247 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RPS3AP61247 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.17■□□□□ 0.66
RPS3AP61247 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RPS3AP61247 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS3AP61247 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RPS3AP61247 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RPS3AP61247 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RPS3AP61247 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.17■□□□□ 0.66
RPS3AP61247 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS3AP61247 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS3AP61247 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS3AP61247 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS3AP61247 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS3AP61247 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RPS3AP61247 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS3AP61247 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS3AP61247 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
RPS3AP61247 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.16■□□□□ 0.66
RPS3AP61247 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS3AP61247 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS3AP61247 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS3AP61247 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.16■□□□□ 0.66
RPS3AP61247 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RPS3AP61247 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RPS3AP61247 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RPS3AP61247 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS3AP61247 AP004607.4-201ENST00000530158 1459 ntBASIC19.16■□□□□ 0.66
RPS3AP61247 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RPS3AP61247 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS3AP61247 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RPS3AP61247 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS3AP61247 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS3AP61247 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS3AP61247 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS3AP61247 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.15■□□□□ 0.66
RPS3AP61247 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPS3AP61247 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RPS3AP61247 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms