Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.07■□□□□ 0.48
FOXG1P55316 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.07■□□□□ 0.48
FOXG1P55316 AC142086.2-201ENST00000569753 217 ntBASIC18.07■□□□□ 0.48
FOXG1P55316 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.07■□□□□ 0.48
FOXG1P55316 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXG1P55316 CYP21A1P-202ENST00000354927 1481 ntBASIC18.07■□□□□ 0.48
FOXG1P55316 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXG1P55316 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXG1P55316 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
FOXG1P55316 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.06■□□□□ 0.48
FOXG1P55316 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXG1P55316 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXG1P55316 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.06■□□□□ 0.48
FOXG1P55316 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXG1P55316 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXG1P55316 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXG1P55316 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXG1P55316 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXG1P55316 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXG1P55316 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
FOXG1P55316 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXG1P55316 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXG1P55316 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXG1P55316 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXG1P55316 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXG1P55316 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.05■□□□□ 0.48
FOXG1P55316 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXG1P55316 CYP2T3P-201ENST00000601990 817 ntBASIC18.05■□□□□ 0.48
FOXG1P55316 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXG1P55316 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXG1P55316 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXG1P55316 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXG1P55316 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXG1P55316 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXG1P55316 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXG1P55316 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXG1P55316 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXG1P55316 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
FOXG1P55316 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXG1P55316 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXG1P55316 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXG1P55316 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXG1P55316 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
FOXG1P55316 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXG1P55316 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXG1P55316 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXG1P55316 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
FOXG1P55316 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
FOXG1P55316 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXG1P55316 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXG1P55316 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.04■□□□□ 0.48
FOXG1P55316 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
FOXG1P55316 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXG1P55316 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXG1P55316 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
FOXG1P55316 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
FOXG1P55316 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXG1P55316 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
FOXG1P55316 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
FOXG1P55316 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXG1P55316 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXG1P55316 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
FOXG1P55316 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXG1P55316 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXG1P55316 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXG1P55316 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXG1P55316 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXG1P55316 AC100791.3-201ENST00000617619 330 ntBASIC18.03■□□□□ 0.48
FOXG1P55316 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXG1P55316 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXG1P55316 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXG1P55316 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXG1P55316 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXG1P55316 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXG1P55316 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
FOXG1P55316 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
FOXG1P55316 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
FOXG1P55316 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 MCRIP2P1-201ENST00000394346 511 ntBASIC18.02■□□□□ 0.48
FOXG1P55316 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXG1P55316 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms