Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUBP1P53384 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.63■□□□□ 0.89
NUBP1P53384 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.63■□□□□ 0.89
NUBP1P53384 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NUBP1P53384 REXO1L10P-201ENST00000615707 1290 ntBASIC20.63■□□□□ 0.89
NUBP1P53384 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUBP1P53384 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
NUBP1P53384 AC138932.3-201ENST00000567634 1902 ntBASIC20.63■□□□□ 0.89
NUBP1P53384 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUBP1P53384 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUBP1P53384 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NUBP1P53384 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUBP1P53384 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.62■□□□□ 0.89
NUBP1P53384 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUBP1P53384 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.62■□□□□ 0.89
NUBP1P53384 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.62■□□□□ 0.89
NUBP1P53384 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.62■□□□□ 0.89
NUBP1P53384 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
NUBP1P53384 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUBP1P53384 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
NUBP1P53384 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NUBP1P53384 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.62■□□□□ 0.89
NUBP1P53384 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUBP1P53384 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.62■□□□□ 0.89
NUBP1P53384 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUBP1P53384 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.61■□□□□ 0.89
NUBP1P53384 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.61■□□□□ 0.89
NUBP1P53384 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
NUBP1P53384 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.61■□□□□ 0.89
NUBP1P53384 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
NUBP1P53384 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.61■□□□□ 0.89
NUBP1P53384 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUBP1P53384 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.61■□□□□ 0.89
NUBP1P53384 WWOX-216ENST00000569818 525 ntBASIC20.61■□□□□ 0.89
NUBP1P53384 AC010947.1-201ENST00000623454 693 ntBASIC20.61■□□□□ 0.89
NUBP1P53384 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.61■□□□□ 0.89
NUBP1P53384 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUBP1P53384 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NUBP1P53384 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NUBP1P53384 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.61■□□□□ 0.89
NUBP1P53384 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NUBP1P53384 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUBP1P53384 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUBP1P53384 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUBP1P53384 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.6■□□□□ 0.89
NUBP1P53384 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUBP1P53384 PGM5P4-201ENST00000421970 445 ntBASIC20.6■□□□□ 0.89
NUBP1P53384 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.6■□□□□ 0.89
NUBP1P53384 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUBP1P53384 KRT18P56-201ENST00000507275 550 ntBASIC20.6■□□□□ 0.89
NUBP1P53384 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.6■□□□□ 0.89
NUBP1P53384 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUBP1P53384 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.6■□□□□ 0.89
NUBP1P53384 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NUBP1P53384 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUBP1P53384 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUBP1P53384 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NUBP1P53384 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.59■□□□□ 0.89
NUBP1P53384 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.59■□□□□ 0.89
NUBP1P53384 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NUBP1P53384 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NUBP1P53384 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NUBP1P53384 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUBP1P53384 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUBP1P53384 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NUBP1P53384 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUBP1P53384 LIN28AP1-201ENST00000429574 405 ntBASIC20.59■□□□□ 0.89
NUBP1P53384 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NUBP1P53384 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.59■□□□□ 0.89
NUBP1P53384 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.59■□□□□ 0.89
NUBP1P53384 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.59■□□□□ 0.89
NUBP1P53384 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.59■□□□□ 0.89
NUBP1P53384 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUBP1P53384 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.58■□□□□ 0.89
NUBP1P53384 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.58■□□□□ 0.89
NUBP1P53384 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.58■□□□□ 0.89
NUBP1P53384 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NUBP1P53384 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
NUBP1P53384 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NUBP1P53384 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.58■□□□□ 0.89
NUBP1P53384 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.58■□□□□ 0.89
NUBP1P53384 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NUBP1P53384 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.58■□□□□ 0.89
NUBP1P53384 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.58■□□□□ 0.89
NUBP1P53384 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.58■□□□□ 0.88
NUBP1P53384 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.58■□□□□ 0.88
NUBP1P53384 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUBP1P53384 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUBP1P53384 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 AC026396.1-201ENST00000419388 421 ntBASIC20.57■□□□□ 0.88
NUBP1P53384 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NUBP1P53384 KRT18P48-201ENST00000434763 852 ntBASIC20.57■□□□□ 0.88
NUBP1P53384 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NUBP1P53384 AC116562.2-201ENST00000507042 360 ntBASIC20.57■□□□□ 0.88
NUBP1P53384 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms