Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC25A1P53007 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC25A1P53007 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC25A1P53007 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC25A1P53007 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SLC25A1P53007 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.28■□□□□ 0.52
SLC25A1P53007 DUX4L2-201ENST00000561772 1275 ntBASIC18.28■□□□□ 0.52
SLC25A1P53007 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
SLC25A1P53007 DUX4L6-201ENST00000626483 1275 ntBASIC18.28■□□□□ 0.52
SLC25A1P53007 DUX4L1-201ENST00000627662 1275 ntBASIC18.28■□□□□ 0.52
SLC25A1P53007 DUX4L8-201ENST00000629013 1275 ntBASIC18.28■□□□□ 0.52
SLC25A1P53007 DUX4L3-201ENST00000630187 1275 ntBASIC18.28■□□□□ 0.52
SLC25A1P53007 DUX4L7-201ENST00000630678 1275 ntBASIC18.28■□□□□ 0.52
SLC25A1P53007 DUX4L5-201ENST00000630834 1275 ntBASIC18.28■□□□□ 0.52
SLC25A1P53007 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.28■□□□□ 0.52
SLC25A1P53007 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC25A1P53007 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC25A1P53007 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC25A1P53007 AL121603.2-201ENST00000557373 2117 ntBASIC18.28■□□□□ 0.52
SLC25A1P53007 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SLC25A1P53007 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC25A1P53007 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC25A1P53007 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC25A1P53007 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC25A1P53007 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC25A1P53007 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC25A1P53007 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC25A1P53007 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC25A1P53007 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC25A1P53007 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC25A1P53007 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC25A1P53007 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.27■□□□□ 0.52
SLC25A1P53007 AC005837.3-201ENST00000612163 286 ntBASIC18.27■□□□□ 0.52
SLC25A1P53007 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC25A1P53007 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC25A1P53007 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.27■□□□□ 0.51
SLC25A1P53007 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SLC25A1P53007 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.27■□□□□ 0.51
SLC25A1P53007 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SLC25A1P53007 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SLC25A1P53007 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SLC25A1P53007 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.27■□□□□ 0.51
SLC25A1P53007 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SLC25A1P53007 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC25A1P53007 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC25A1P53007 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC25A1P53007 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC25A1P53007 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC25A1P53007 AC105265.2-201ENST00000467189 838 ntBASIC18.26■□□□□ 0.51
SLC25A1P53007 MIR2861-201ENST00000636310 90 ntBASIC18.26■□□□□ 0.51
SLC25A1P53007 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC25A1P53007 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC25A1P53007 AC116050.2-201ENST00000612102 1779 ntBASIC18.26■□□□□ 0.51
SLC25A1P53007 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC25A1P53007 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SLC25A1P53007 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SLC25A1P53007 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC25A1P53007 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC25A1P53007 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 AC099778.1-201ENST00000568593 1911 ntBASIC18.25■□□□□ 0.51
SLC25A1P53007 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SLC25A1P53007 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC25A1P53007 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC25A1P53007 AP001160.3-201ENST00000601484 763 ntBASIC18.25■□□□□ 0.51
SLC25A1P53007 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SLC25A1P53007 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC25A1P53007 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC25A1P53007 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SLC25A1P53007 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC25A1P53007 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC25A1P53007 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SLC25A1P53007 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC25A1P53007 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC25A1P53007 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SLC25A1P53007 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.24■□□□□ 0.51
SLC25A1P53007 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC25A1P53007 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC25A1P53007 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC25A1P53007 AC104187.1-201ENST00000607510 612 ntBASIC18.24■□□□□ 0.51
SLC25A1P53007 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC25A1P53007 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLC25A1P53007 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms