Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
SMSP52788 AC005224.4-201ENST00000583262 1652 ntBASIC19.2■□□□□ 0.66
SMSP52788 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMSP52788 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMSP52788 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SMSP52788 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.2■□□□□ 0.66
SMSP52788 TSPY6P-201ENST00000448518 926 ntBASIC19.2■□□□□ 0.66
SMSP52788 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.2■□□□□ 0.66
SMSP52788 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.2■□□□□ 0.66
SMSP52788 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.2■□□□□ 0.66
SMSP52788 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMSP52788 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SMSP52788 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.2■□□□□ 0.66
SMSP52788 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.2■□□□□ 0.66
SMSP52788 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMSP52788 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMSP52788 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMSP52788 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
SMSP52788 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
SMSP52788 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMSP52788 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 AC003102.1-202ENST00000563394 1796 ntBASIC19.19■□□□□ 0.66
SMSP52788 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SMSP52788 FEM1AP1-201ENST00000431297 1995 ntBASIC19.19■□□□□ 0.66
SMSP52788 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.19■□□□□ 0.66
SMSP52788 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.19■□□□□ 0.66
SMSP52788 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.19■□□□□ 0.66
SMSP52788 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.19■□□□□ 0.66
SMSP52788 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.19■□□□□ 0.66
SMSP52788 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SMSP52788 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMSP52788 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SMSP52788 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMSP52788 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMSP52788 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMSP52788 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.18■□□□□ 0.66
SMSP52788 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMSP52788 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMSP52788 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.18■□□□□ 0.66
SMSP52788 KRT18P6-201ENST00000555540 1265 ntBASIC19.18■□□□□ 0.66
SMSP52788 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMSP52788 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMSP52788 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMSP52788 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.18■□□□□ 0.66
SMSP52788 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMSP52788 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMSP52788 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 AP004607.7-201ENST00000527152 1677 ntBASIC19.17■□□□□ 0.66
SMSP52788 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.17■□□□□ 0.66
SMSP52788 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMSP52788 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SMSP52788 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.17■□□□□ 0.66
SMSP52788 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 TSPY20P-201ENST00000450910 630 ntBASIC19.17■□□□□ 0.66
SMSP52788 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.17■□□□□ 0.66
SMSP52788 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMSP52788 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.17■□□□□ 0.66
SMSP52788 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.17■□□□□ 0.66
SMSP52788 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.17■□□□□ 0.66
SMSP52788 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.17■□□□□ 0.66
SMSP52788 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.17■□□□□ 0.66
SMSP52788 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.17■□□□□ 0.66
SMSP52788 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SMSP52788 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMSP52788 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SMSP52788 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.16■□□□□ 0.66
SMSP52788 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.16■□□□□ 0.66
SMSP52788 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMSP52788 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.16■□□□□ 0.66
SMSP52788 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMSP52788 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMSP52788 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SMSP52788 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMSP52788 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.16■□□□□ 0.66
SMSP52788 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.16■□□□□ 0.66
SMSP52788 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms