Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.52■□□□□ 0.88
ZNF140P52738 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF140P52738 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZNF140P52738 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF140P52738 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF140P52738 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ZNF140P52738 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZNF140P52738 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF140P52738 FEM1AP1-201ENST00000431297 1995 ntBASIC20.52■□□□□ 0.87
ZNF140P52738 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZNF140P52738 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
ZNF140P52738 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
ZNF140P52738 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF140P52738 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZNF140P52738 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
ZNF140P52738 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZNF140P52738 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF140P52738 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF140P52738 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF140P52738 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF140P52738 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF140P52738 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZNF140P52738 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ZNF140P52738 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
ZNF140P52738 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF140P52738 AL157384.1-201ENST00000445995 2473 ntBASIC20.51■□□□□ 0.87
ZNF140P52738 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF140P52738 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF140P52738 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF140P52738 AL121603.2-201ENST00000557373 2117 ntBASIC20.5■□□□□ 0.87
ZNF140P52738 AC004911.1-201ENST00000416316 871 ntBASIC20.5■□□□□ 0.87
ZNF140P52738 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.5■□□□□ 0.87
ZNF140P52738 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF140P52738 AL137784.2-201ENST00000607332 1000 ntBASIC20.5■□□□□ 0.87
ZNF140P52738 AC231657.2-201ENST00000624556 255 ntBASIC20.5■□□□□ 0.87
ZNF140P52738 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF140P52738 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF140P52738 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
ZNF140P52738 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF140P52738 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF140P52738 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF140P52738 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF140P52738 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ZNF140P52738 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF140P52738 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF140P52738 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF140P52738 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF140P52738 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF140P52738 CYP2T1P-201ENST00000432607 1285 ntBASIC20.49■□□□□ 0.87
ZNF140P52738 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF140P52738 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF140P52738 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF140P52738 MIR2861-201ENST00000636310 90 ntBASIC20.49■□□□□ 0.87
ZNF140P52738 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF140P52738 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF140P52738 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ZNF140P52738 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.49■□□□□ 0.87
ZNF140P52738 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ZNF140P52738 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF140P52738 AP005212.1-201ENST00000581547 1997 ntBASIC20.48■□□□□ 0.87
ZNF140P52738 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF140P52738 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF140P52738 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.48■□□□□ 0.87
ZNF140P52738 AC073314.1-201ENST00000568729 2216 ntBASIC20.48■□□□□ 0.87
ZNF140P52738 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.48■□□□□ 0.87
ZNF140P52738 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF140P52738 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ZNF140P52738 AC007322.1-201ENST00000426983 750 ntBASIC20.48■□□□□ 0.87
ZNF140P52738 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF140P52738 AC080038.1-201ENST00000611274 1154 ntBASIC20.48■□□□□ 0.87
ZNF140P52738 AC073111.5-205ENST00000641717 521 ntBASIC20.48■□□□□ 0.87
ZNF140P52738 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF140P52738 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF140P52738 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF140P52738 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF140P52738 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.48■□□□□ 0.87
ZNF140P52738 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF140P52738 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF140P52738 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
ZNF140P52738 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ZNF140P52738 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF140P52738 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF140P52738 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF140P52738 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF140P52738 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms