Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SSR1P43307 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR1P43307 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SSR1P43307 POU5F1P4-201ENST00000413175 1085 ntBASIC21.76■■□□□ 1.07
SSR1P43307 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR1P43307 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.76■■□□□ 1.07
SSR1P43307 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.76■■□□□ 1.07
SSR1P43307 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR1P43307 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SSR1P43307 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.76■■□□□ 1.07
SSR1P43307 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SSR1P43307 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR1P43307 AC092667.1-201ENST00000434301 2586 ntBASIC21.76■■□□□ 1.07
SSR1P43307 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SSR1P43307 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SSR1P43307 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SSR1P43307 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SSR1P43307 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.75■■□□□ 1.07
SSR1P43307 ZNRF2P3-201ENST00000424200 374 ntBASIC21.75■■□□□ 1.07
SSR1P43307 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.75■■□□□ 1.07
SSR1P43307 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.75■■□□□ 1.07
SSR1P43307 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.75■■□□□ 1.07
SSR1P43307 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SSR1P43307 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSR1P43307 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SSR1P43307 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.74■■□□□ 1.07
SSR1P43307 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SSR1P43307 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SSR1P43307 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
SSR1P43307 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.74■■□□□ 1.07
SSR1P43307 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.74■■□□□ 1.07
SSR1P43307 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.74■■□□□ 1.07
SSR1P43307 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SSR1P43307 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.74■■□□□ 1.07
SSR1P43307 AC104187.1-201ENST00000607510 612 ntBASIC21.74■■□□□ 1.07
SSR1P43307 AC120498.10-201ENST00000621827 505 ntBASIC21.74■■□□□ 1.07
SSR1P43307 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.74■■□□□ 1.07
SSR1P43307 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR1P43307 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR1P43307 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.74■■□□□ 1.07
SSR1P43307 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR1P43307 FEM1AP1-201ENST00000431297 1995 ntBASIC21.74■■□□□ 1.07
SSR1P43307 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR1P43307 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SSR1P43307 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSR1P43307 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSR1P43307 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSR1P43307 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
SSR1P43307 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.73■■□□□ 1.07
SSR1P43307 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.73■■□□□ 1.07
SSR1P43307 YBX1P1-201ENST00000445822 960 ntBASIC21.73■■□□□ 1.07
SSR1P43307 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.73■■□□□ 1.07
SSR1P43307 AC138907.5-202ENST00000569484 235 ntBASIC21.73■■□□□ 1.07
SSR1P43307 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSR1P43307 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SSR1P43307 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSR1P43307 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
SSR1P43307 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
SSR1P43307 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSR1P43307 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SSR1P43307 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR1P43307 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR1P43307 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR1P43307 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR1P43307 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
SSR1P43307 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SSR1P43307 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR1P43307 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR1P43307 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.72■■□□□ 1.07
SSR1P43307 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.72■■□□□ 1.07
SSR1P43307 AC123595.1-201ENST00000440769 1046 ntBASIC21.72■■□□□ 1.07
SSR1P43307 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SSR1P43307 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.72■■□□□ 1.07
SSR1P43307 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSR1P43307 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 AC073130.3-201ENST00000624389 2278 ntBASIC21.71■■□□□ 1.07
SSR1P43307 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SSR1P43307 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.71■■□□□ 1.07
SSR1P43307 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.71■■□□□ 1.07
SSR1P43307 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.71■■□□□ 1.07
SSR1P43307 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms