Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 YDR089WYDR089W 2610 nt3.42□□□□□ -1.86
SDS3P40505 TMA108YIL137C 2841 nt3.42□□□□□ -1.86
SDS3P40505 SIZ1YDR409W 2715 nt3.42□□□□□ -1.86
SDS3P40505 YGL165CYGL165C 579 nt3.41□□□□□ -1.86
SDS3P40505 YLR154C-HYLR154C-H 132 nt3.41□□□□□ -1.86
SDS3P40505 YLR156C-AYLR156C-A 132 nt3.41□□□□□ -1.86
SDS3P40505 YLR157C-CYLR157C-C 132 nt3.41□□□□□ -1.86
SDS3P40505 YLR159C-AYLR159C-A 132 nt3.41□□□□□ -1.86
SDS3P40505 YMR316C-AYMR316C-A 312 nt3.41□□□□□ -1.86
SDS3P40505 HOP1YIL072W 1818 nt3.41□□□□□ -1.86
SDS3P40505 APC5YOR249C 2058 nt3.4□□□□□ -1.86
SDS3P40505 YNL193WYNL193W 1677 nt3.4□□□□□ -1.86
SDS3P40505 YDL068WYDL068W 330 nt3.4□□□□□ -1.87
SDS3P40505 tQ(UUG)BtQ(UUG)B 72 nt3.4□□□□□ -1.87
SDS3P40505 YJR003CYJR003C 1560 nt3.4□□□□□ -1.87
SDS3P40505 TIM18YOR297C 579 nt3.4□□□□□ -1.87
SDS3P40505 PIS1YPR113W 663 nt3.4□□□□□ -1.87
SDS3P40505 snR36snR36 182 nt3.4□□□□□ -1.87
SDS3P40505 VPS9YML097C 1356 nt3.39□□□□□ -1.87
SDS3P40505 ISW2YOR304W 3363 nt3.39□□□□□ -1.87
SDS3P40505 YER038W-AYER038W-A 381 nt3.39□□□□□ -1.87
SDS3P40505 YHR212CYHR212C 336 nt3.39□□□□□ -1.87
SDS3P40505 RPA12YJR063W 378 nt3.39□□□□□ -1.87
SDS3P40505 YLR031WYLR031W 561 nt3.39□□□□□ -1.87
SDS3P40505 YAR060CYAR060C 336 nt3.39□□□□□ -1.87
SDS3P40505 COX7YMR256C 183 nt3.39□□□□□ -1.87
SDS3P40505 YNL198CYNL198C 303 nt3.39□□□□□ -1.87
SDS3P40505 CSR2YPR030W 3366 nt3.39□□□□□ -1.87
SDS3P40505 CHS2YBR038W 2892 nt3.39□□□□□ -1.87
SDS3P40505 LCB4YOR171C 1875 nt3.39□□□□□ -1.87
SDS3P40505 STE5YDR103W 2754 nt3.39□□□□□ -1.87
SDS3P40505 FAS1YKL182W 6156 nt3.38□□□□□ -1.87
SDS3P40505 TFC1YBR123C 1950 nt3.38□□□□□ -1.87
SDS3P40505 VTC4YJL012C 2166 nt3.38□□□□□ -1.87
SDS3P40505 NTO1YPR031W 2247 nt3.38□□□□□ -1.87
SDS3P40505 tF(GAA)DtF(GAA)D 73 nt3.38□□□□□ -1.87
SDS3P40505 tF(GAA)NtF(GAA)N 73 nt3.38□□□□□ -1.87
SDS3P40505 COX23YHR116W 456 nt3.38□□□□□ -1.87
SDS3P40505 YBL028CYBL028C 321 nt3.38□□□□□ -1.87
SDS3P40505 YMR294W-AYMR294W-A 360 nt3.38□□□□□ -1.87
SDS3P40505 YBL108WYBL108W 306 nt3.38□□□□□ -1.87
SDS3P40505 PCK1YKR097W 1650 nt3.38□□□□□ -1.87
SDS3P40505 SIN4YNL236W 2925 nt3.38□□□□□ -1.87
SDS3P40505 TOP1YOL006C 2310 nt3.38□□□□□ -1.87
SDS3P40505 RRM3YHR031C 2172 nt3.38□□□□□ -1.87
SDS3P40505 TSC11YER093C 4293 nt3.37□□□□□ -1.87
SDS3P40505 EAP1YKL204W 1899 nt3.37□□□□□ -1.87
SDS3P40505 YDR442WYDR442W 393 nt3.37□□□□□ -1.87
SDS3P40505 CGR1YGL029W 363 nt3.37□□□□□ -1.87
SDS3P40505 RNR4YGR180C 1038 nt3.37□□□□□ -1.87
SDS3P40505 YHR007C-AYHR007C-A 216 nt3.37□□□□□ -1.87
SDS3P40505 YPR136CYPR136C 513 nt3.37□□□□□ -1.87
SDS3P40505 EMP70YLR083C 2004 nt3.37□□□□□ -1.87
SDS3P40505 OSH6YKR003W 1347 nt3.37□□□□□ -1.87
SDS3P40505 KAP104YBR017C 2757 nt3.37□□□□□ -1.87
SDS3P40505 POL3YDL102W 3294 nt3.37□□□□□ -1.87
SDS3P40505 ICR1ICR1 3199 nt3.37□□□□□ -1.87
SDS3P40505 UBP5YER144C 2418 nt3.36□□□□□ -1.87
SDS3P40505 DAP2YHR028C 2457 nt3.36□□□□□ -1.87
SDS3P40505 RPS29BYDL061C 171 nt3.36□□□□□ -1.87
SDS3P40505 YGL042CYGL042C 306 nt3.36□□□□□ -1.87
SDS3P40505 YJL197C-AYJL197C-A 282 nt3.36□□□□□ -1.87
SDS3P40505 MBB1YJL199C 327 nt3.36□□□□□ -1.87
SDS3P40505 HHT2YNL031C 411 nt3.36□□□□□ -1.87
SDS3P40505 PEX17YNL214W 600 nt3.36□□□□□ -1.87
SDS3P40505 VAC14YLR386W 2643 nt3.36□□□□□ -1.87
SDS3P40505 UTP13YLR222C 2454 nt3.35□□□□□ -1.87
SDS3P40505 CIN8YEL061C 3003 nt3.35□□□□□ -1.87
SDS3P40505 YER107W-AYER107W-A 321 nt3.35□□□□□ -1.87
SDS3P40505 RPL1BYGL135W 654 nt3.35□□□□□ -1.87
SDS3P40505 YHR139C-AYHR139C-A 312 nt3.35□□□□□ -1.87
SDS3P40505 YIL046W-AYIL046W-A 165 nt3.35□□□□□ -1.87
SDS3P40505 RPL39YJL189W 156 nt3.35□□□□□ -1.87
SDS3P40505 RPL16BYNL069C 597 nt3.35□□□□□ -1.87
SDS3P40505 BIL1YOR304C-A 231 nt3.35□□□□□ -1.87
SDS3P40505 RPL1AYPL220W 654 nt3.35□□□□□ -1.87
SDS3P40505 MSB2YGR014W 3921 nt3.35□□□□□ -1.87
SDS3P40505 CDH1YGL003C 1701 nt3.35□□□□□ -1.87
SDS3P40505 RCY1YJL204C 2523 nt3.35□□□□□ -1.87
SDS3P40505 UTP25YIL091C 2166 nt3.35□□□□□ -1.87
SDS3P40505 STE6YKL209C 3873 nt3.35□□□□□ -1.87
SDS3P40505 IRC3YDR332W 2070 nt3.34□□□□□ -1.87
SDS3P40505 YDR338CYDR338C 2088 nt3.34□□□□□ -1.87
SDS3P40505 YCK2YNL154C 1641 nt3.34□□□□□ -1.87
SDS3P40505 YFR054CYFR054C 579 nt3.34□□□□□ -1.87
SDS3P40505 YGR107WYGR107W 450 nt3.34□□□□□ -1.87
SDS3P40505 YOR146WYOR146W 306 nt3.34□□□□□ -1.87
SDS3P40505 FAR1YJL157C 2493 nt3.34□□□□□ -1.88
SDS3P40505 PEX6YNL329C 3093 nt3.34□□□□□ -1.88
SDS3P40505 NIC96YFR002W 2520 nt3.34□□□□□ -1.88
SDS3P40505 MKT1YNL085W 2493 nt3.33□□□□□ -1.88
SDS3P40505 PIN4YBL051C 2007 nt3.33□□□□□ -1.88
SDS3P40505 VEL1YGL258W 621 nt3.33□□□□□ -1.88
SDS3P40505 YJL222W-BYJL222W-B 138 nt3.33□□□□□ -1.88
SDS3P40505 COA4YLR218C 453 nt3.33□□□□□ -1.88
SDS3P40505 YLR230WYLR230W 306 nt3.33□□□□□ -1.88
SDS3P40505 ISF1YMR081C 1017 nt3.33□□□□□ -1.88
SDS3P40505 HHF2YNL030W 312 nt3.33□□□□□ -1.88
SDS3P40505 IMH1YLR309C 2736 nt3.33□□□□□ -1.88
SDS3P40505 NDT80YHR124W 1884 nt3.33□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 287.6 ms