Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 CWC22YGR278W 1734 nt3.33□□□□□ -1.88
SDP1P40479 21S_rRNA21S_rRNA 3296 nt3.33□□□□□ -1.88
SDP1P40479 SPG3YDR504C 384 nt3.33□□□□□ -1.88
SDP1P40479 YPL238CYPL238C 390 nt3.33□□□□□ -1.88
SDP1P40479 TAF1YGR274C 3201 nt3.33□□□□□ -1.88
SDP1P40479 CDC45YLR103C 1953 nt3.32□□□□□ -1.88
SDP1P40479 TRZ1YKR079C 2517 nt3.32□□□□□ -1.88
SDP1P40479 LOS1YKL205W 3303 nt3.32□□□□□ -1.88
SDP1P40479 SHE2YKL130C 741 nt3.32□□□□□ -1.88
SDP1P40479 YLR031WYLR031W 561 nt3.32□□□□□ -1.88
SDP1P40479 RFC3YNL290W 1023 nt3.32□□□□□ -1.88
SDP1P40479 STN1YDR082W 1485 nt3.32□□□□□ -1.88
SDP1P40479 GYL1YMR192W 2163 nt3.32□□□□□ -1.88
SDP1P40479 STU1YBL034C 4542 nt3.32□□□□□ -1.88
SDP1P40479 URA2YJL130C 6645 nt3.31□□□□□ -1.88
SDP1P40479 OSH3YHR073W 2991 nt3.31□□□□□ -1.88
SDP1P40479 Q0032Q0032 291 nt3.31□□□□□ -1.88
SDP1P40479 tL(UAG)JtL(UAG)J 82 nt3.31□□□□□ -1.88
SDP1P40479 tL(UAG)L1tL(UAG)L1 82 nt3.31□□□□□ -1.88
SDP1P40479 tL(UAG)L2tL(UAG)L2 82 nt3.31□□□□□ -1.88
SDP1P40479 PRE8YML092C 753 nt3.31□□□□□ -1.88
SDP1P40479 YOR225WYOR225W 330 nt3.31□□□□□ -1.88
SDP1P40479 EGD1YPL037C 474 nt3.31□□□□□ -1.88
SDP1P40479 ISU1YPL135W 498 nt3.31□□□□□ -1.88
SDP1P40479 YCG1YDR325W 3108 nt3.31□□□□□ -1.88
SDP1P40479 SEC15YGL233W 2733 nt3.31□□□□□ -1.88
SDP1P40479 DNM1YLL001W 2274 nt3.31□□□□□ -1.88
SDP1P40479 CCT7YJL111W 1653 nt3.3□□□□□ -1.88
SDP1P40479 TSA2YDR453C 591 nt3.3□□□□□ -1.88
SDP1P40479 RMT2YDR465C 1239 nt3.3□□□□□ -1.88
SDP1P40479 GCN4YEL009C 846 nt3.3□□□□□ -1.88
SDP1P40479 CAJ1YER048C 1176 nt3.3□□□□□ -1.88
SDP1P40479 YER107W-AYER107W-A 321 nt3.3□□□□□ -1.88
SDP1P40479 BAT1YHR208W 1182 nt3.3□□□□□ -1.88
SDP1P40479 URM1YIL008W 300 nt3.3□□□□□ -1.88
SDP1P40479 ARO80YDR421W 2853 nt3.3□□□□□ -1.88
SDP1P40479 YGL140CYGL140C 3660 nt3.3□□□□□ -1.88
SDP1P40479 RAD4YER162C 2265 nt3.3□□□□□ -1.88
SDP1P40479 NMA111YNL123W 2994 nt3.29□□□□□ -1.88
SDP1P40479 ABP140YOR239W 1887 nt3.29□□□□□ -1.88
SDP1P40479 YCR018C-AYCR018C-A 255 nt3.29□□□□□ -1.88
SDP1P40479 HMF1YER057C 390 nt3.29□□□□□ -1.88
SDP1P40479 LSM8YJR022W 330 nt3.29□□□□□ -1.88
SDP1P40479 ANB1YJR047C 474 nt3.29□□□□□ -1.88
SDP1P40479 YJR112W-AYJR112W-A 330 nt3.29□□□□□ -1.88
SDP1P40479 YKL183C-AYKL183C-A 213 nt3.29□□□□□ -1.88
SDP1P40479 IMP4YNL075W 873 nt3.29□□□□□ -1.88
SDP1P40479 PGA1YNL158W 597 nt3.29□□□□□ -1.88
SDP1P40479 RPS23BYPR132W 438 nt3.29□□□□□ -1.88
SDP1P40479 DAN4YJR151C 3486 nt3.29□□□□□ -1.88
SDP1P40479 ZDS2YML109W 2829 nt3.29□□□□□ -1.88
SDP1P40479 ATG21YPL100W 1491 nt3.28□□□□□ -1.88
SDP1P40479 MDN1YLR106C 14733 nt3.28□□□□□ -1.88
SDP1P40479 RSF2YJR127C 4143 nt3.28□□□□□ -1.88
SDP1P40479 RAD26YJR035W 3258 nt3.28□□□□□ -1.88
SDP1P40479 IGO2YHR132W-A 396 nt3.28□□□□□ -1.88
SDP1P40479 YNL337WYNL337W 255 nt3.28□□□□□ -1.88
SDP1P40479 HFM1YGL251C 3564 nt3.28□□□□□ -1.88
SDP1P40479 RDS1YCR106W 2499 nt3.27□□□□□ -1.89
SDP1P40479 YDR250CYDR250C 276 nt3.27□□□□□ -1.89
SDP1P40479 PAU14YIL176C 363 nt3.27□□□□□ -1.89
SDP1P40479 PAU1YJL223C 363 nt3.27□□□□□ -1.89
SDP1P40479 PEX11YOL147C 711 nt3.27□□□□□ -1.89
SDP1P40479 RRN6YBL014C 2685 nt3.27□□□□□ -1.89
SDP1P40479 BYE1YKL005C 1785 nt3.27□□□□□ -1.89
SDP1P40479 BNI4YNL233W 2679 nt3.26□□□□□ -1.89
SDP1P40479 PWP2YCR057C 2772 nt3.26□□□□□ -1.89
SDP1P40479 PDC2YDR081C 2778 nt3.26□□□□□ -1.89
SDP1P40479 TIM8YJR135W-A 264 nt3.26□□□□□ -1.89
SDP1P40479 MRP8YKL142W 660 nt3.26□□□□□ -1.89
SDP1P40479 JLP2YMR132C 627 nt3.26□□□□□ -1.89
SDP1P40479 IRC23YOR044W 474 nt3.26□□□□□ -1.89
SDP1P40479 YPR014CYPR014C 330 nt3.26□□□□□ -1.89
SDP1P40479 BIT61YJL058C 1632 nt3.26□□□□□ -1.89
SDP1P40479 AIP1YMR092C 1848 nt3.26□□□□□ -1.89
SDP1P40479 RNR1YER070W 2667 nt3.26□□□□□ -1.89
SDP1P40479 HEF3YNL014W 3135 nt3.25□□□□□ -1.89
SDP1P40479 MNT3YIL014W 1893 nt3.25□□□□□ -1.89
SDP1P40479 AAD3YCR107W 1092 nt3.25□□□□□ -1.89
SDP1P40479 YDR183C-AYDR183C-A 258 nt3.25□□□□□ -1.89
SDP1P40479 YFR056CYFR056C 369 nt3.25□□□□□ -1.89
SDP1P40479 tT(UGU)Q1tT(UGU)Q1 76 nt3.25□□□□□ -1.89
SDP1P40479 ISF1YMR081C 1017 nt3.25□□□□□ -1.89
SDP1P40479 YBR137WYBR137W 540 nt3.25□□□□□ -1.89
SDP1P40479 ALA1YOR335C 2877 nt3.25□□□□□ -1.89
SDP1P40479 YBP1YBR216C 2025 nt3.24□□□□□ -1.89
SDP1P40479 VBA4YDR119W 2307 nt3.24□□□□□ -1.89
SDP1P40479 LSM1YJL124C 519 nt3.24□□□□□ -1.89
SDP1P40479 FCF2YLR051C 654 nt3.24□□□□□ -1.89
SDP1P40479 RPS22BYLR367W 393 nt3.24□□□□□ -1.89
SDP1P40479 RPL9BYNL067W 576 nt3.24□□□□□ -1.89
SDP1P40479 CDH1YGL003C 1701 nt3.24□□□□□ -1.89
SDP1P40479 COX1Q0045 1605 nt3.23□□□□□ -1.89
SDP1P40479 RRP5YMR229C 5190 nt3.23□□□□□ -1.89
SDP1P40479 SPT10YJL127C 1923 nt3.23□□□□□ -1.89
SDP1P40479 SSY1YDR160W 2559 nt3.22□□□□□ -1.89
SDP1P40479 SPP382YLR424W 2127 nt3.22□□□□□ -1.89
SDP1P40479 HPA3YEL066W 540 nt3.22□□□□□ -1.89
SDP1P40479 tM(CAU)Q1tM(CAU)Q1 76 nt3.22□□□□□ -1.89
SDP1P40479 YBL073WYBL073W 312 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 58.5 ms