Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RFC4P35249 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFC4P35249 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RFC4P35249 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFC4P35249 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
RFC4P35249 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RFC4P35249 RARRES2P10-201ENST00000564312 460 ntBASIC26.07■■□□□ 1.76
RFC4P35249 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RFC4P35249 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.07■■□□□ 1.76
RFC4P35249 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFC4P35249 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RFC4P35249 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFC4P35249 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RFC4P35249 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RFC4P35249 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RFC4P35249 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RFC4P35249 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RFC4P35249 RCN1P1-201ENST00000400413 996 ntBASIC26.06■■□□□ 1.76
RFC4P35249 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.06■■□□□ 1.76
RFC4P35249 AC012306.2-201ENST00000609350 630 ntBASIC26.06■■□□□ 1.76
RFC4P35249 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.06■■□□□ 1.76
RFC4P35249 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.06■■□□□ 1.76
RFC4P35249 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.05■■□□□ 1.76
RFC4P35249 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.05■■□□□ 1.76
RFC4P35249 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFC4P35249 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.05■■□□□ 1.76
RFC4P35249 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.05■■□□□ 1.76
RFC4P35249 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RFC4P35249 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.05■■□□□ 1.76
RFC4P35249 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFC4P35249 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
RFC4P35249 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.05■■□□□ 1.76
RFC4P35249 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
RFC4P35249 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
RFC4P35249 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
RFC4P35249 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.05■■□□□ 1.76
RFC4P35249 FAM99A-202ENST00000538190 1989 ntBASIC26.05■■□□□ 1.76
RFC4P35249 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.05■■□□□ 1.76
RFC4P35249 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.05■■□□□ 1.76
RFC4P35249 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFC4P35249 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.05■■□□□ 1.76
RFC4P35249 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.04■■□□□ 1.76
RFC4P35249 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
RFC4P35249 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RFC4P35249 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.04■■□□□ 1.76
RFC4P35249 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.04■■□□□ 1.76
RFC4P35249 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
RFC4P35249 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFC4P35249 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFC4P35249 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RFC4P35249 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFC4P35249 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.03■■□□□ 1.76
RFC4P35249 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
RFC4P35249 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.03■■□□□ 1.76
RFC4P35249 AL390719.1-204ENST00000412397 1219 ntBASIC26.03■■□□□ 1.76
RFC4P35249 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RFC4P35249 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.03■■□□□ 1.76
RFC4P35249 PPOX-219ENST00000544598 813 ntTSL 2 BASIC26.03■■□□□ 1.76
RFC4P35249 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.03■■□□□ 1.76
RFC4P35249 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.03■■□□□ 1.76
RFC4P35249 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.03■■□□□ 1.76
RFC4P35249 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.03■■□□□ 1.76
RFC4P35249 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RFC4P35249 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RFC4P35249 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
RFC4P35249 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RFC4P35249 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
RFC4P35249 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RFC4P35249 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.02■■□□□ 1.76
RFC4P35249 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.02■■□□□ 1.76
RFC4P35249 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.02■■□□□ 1.76
RFC4P35249 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RFC4P35249 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RFC4P35249 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.02■■□□□ 1.76
RFC4P35249 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RFC4P35249 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.02■■□□□ 1.76
RFC4P35249 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RFC4P35249 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RFC4P35249 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.02■■□□□ 1.76
RFC4P35249 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RFC4P35249 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFC4P35249 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
RFC4P35249 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFC4P35249 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
RFC4P35249 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFC4P35249 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFC4P35249 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
RFC4P35249 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC26.01■■□□□ 1.75
RFC4P35249 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC26.01■■□□□ 1.75
RFC4P35249 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFC4P35249 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26■■□□□ 1.75
RFC4P35249 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RFC4P35249 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26■■□□□ 1.75
RFC4P35249 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26■■□□□ 1.75
RFC4P35249 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
RFC4P35249 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26■■□□□ 1.75
RFC4P35249 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26■■□□□ 1.75
RFC4P35249 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26■■□□□ 1.75
RFC4P35249 RER1-204ENST00000378518 522 ntTSL 3 BASIC26■■□□□ 1.75
RFC4P35249 PGM5P4-201ENST00000421970 445 ntBASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms